Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 U7.2-201ENST00000607576 63 ntBASIC-1.56□□□□□ -2.66
HMGB1P1B2RPK0 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.57□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.57□□□□□ -2.66
HMGB1P1B2RPK0 RNA5SP272-201ENST00000516095 111 ntBASIC-1.57□□□□□ -2.66
HMGB1P1B2RPK0 MIR4464-201ENST00000580818 92 ntBASIC-1.57□□□□□ -2.66
HMGB1P1B2RPK0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.57□□□□□ -2.66
HMGB1P1B2RPK0 RNU4-32P-201ENST00000363404 141 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-804P-201ENST00000384286 107 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 RNU7-85P-201ENST00000458851 63 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-388P-201ENST00000517012 105 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-389P-201ENST00000517048 105 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 MIR3140-201ENST00000583685 90 ntBASIC-1.58□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-379P-201ENST00000363813 104 ntBASIC-1.59□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-132P-201ENST00000383863 107 ntBASIC-1.59□□□□□ -2.66
HMGB1P1B2RPK0 RNU7-24P-201ENST00000458867 62 ntBASIC-1.59□□□□□ -2.66
HMGB1P1B2RPK0 RNU6-463P-201ENST00000384340 107 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 MIR548U-201ENST00000390728 81 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 SNORD75.2-201ENST00000408784 58 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 AL445584.3-201ENST00000617173 78 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 AC090617.8-201ENST00000623339 167 ntBASIC-1.6□□□□□ -2.67
HMGB1P1B2RPK0 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.61□□□□□ -2.67
HMGB1P1B2RPK0 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
HMGB1P1B2RPK0 AC004792.1-201ENST00000614523 137 ntBASIC-1.61□□□□□ -2.67
HMGB1P1B2RPK0 MIR6888-201ENST00000621977 67 ntBASIC-1.61□□□□□ -2.67
HMGB1P1B2RPK0 SNORD58C-201ENST00000365223 64 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 SNORA24B-201ENST00000384176 131 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 MIR548A1-201ENST00000385041 97 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 MIR577-201ENST00000385196 96 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 RNU6-394P-201ENST00000410735 107 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 SNORD57-201ENST00000448188 72 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 AC068339.1-201ENST00000526965 141 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 AL513043.2-201ENST00000573941 143 ntBASIC-1.62□□□□□ -2.67
HMGB1P1B2RPK0 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.63□□□□□ -2.67
HMGB1P1B2RPK0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.63□□□□□ -2.67
HMGB1P1B2RPK0 MIR3064-201ENST00000581130 66 ntBASIC-1.63□□□□□ -2.67
HMGB1P1B2RPK0 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.64□□□□□ -2.67
HMGB1P1B2RPK0 AC132825.6-201ENST00000638861 357 ntBASIC-1.64□□□□□ -2.67
HMGB1P1B2RPK0 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.65□□□□□ -2.67
HMGB1P1B2RPK0 MIR569-201ENST00000385228 96 ntBASIC-1.65□□□□□ -2.67
HMGB1P1B2RPK0 AC104996.3-201ENST00000590718 94 ntBASIC-1.65□□□□□ -2.67
HMGB1P1B2RPK0 RNU6-924P-201ENST00000362926 108 ntBASIC-1.66□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.66□□□□□ -2.68
HMGB1P1B2RPK0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.66□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 AC026421.1-201ENST00000519101 163 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 MIR4694-201ENST00000578534 80 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 MIR3144-201ENST00000579460 79 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 AC138207.3-201ENST00000585289 166 ntBASIC-1.67□□□□□ -2.68
HMGB1P1B2RPK0 MIR409-201ENST00000362237 79 ntBASIC-1.68□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.68□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.68□□□□□ -2.68
HMGB1P1B2RPK0 AC006254.2-201ENST00000603259 279 ntBASIC-1.68□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-260P-201ENST00000384092 107 ntBASIC-1.69□□□□□ -2.68
HMGB1P1B2RPK0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.69□□□□□ -2.68
HMGB1P1B2RPK0 MIR1255B2-201ENST00000408618 67 ntBASIC-1.69□□□□□ -2.68
HMGB1P1B2RPK0 snoU13.17-201ENST00000458802 104 ntBASIC-1.69□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-832P-201ENST00000363319 107 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 SNORD115-33-201ENST00000363723 82 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 SNORA33.1-201ENST00000364957 130 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 MIR29B1-201ENST00000385015 81 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 SNORA26.4-201ENST00000391188 123 ntBASIC-1.7□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-382P-201ENST00000365181 106 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-644P-201ENST00000391155 98 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 SNORD4B-201ENST00000459083 72 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 RNU6-62P-201ENST00000516526 102 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 MIR4439-201ENST00000583746 80 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 AL035470.1-201ENST00000622571 220 ntBASIC-1.71□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.72□□□□□ -2.68
HMGB1P1B2RPK0 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.72□□□□□ -2.68
HMGB1P1B2RPK0 RNA5SP147-201ENST00000516493 109 ntBASIC-1.72□□□□□ -2.68
HMGB1P1B2RPK0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.72□□□□□ -2.68
HMGB1P1B2RPK0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
HMGB1P1B2RPK0 RNY3P2-201ENST00000362918 102 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 RNU6-576P-201ENST00000390854 102 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 RNA5SP461-201ENST00000516451 104 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 RNU6-426P-201ENST00000516464 97 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 CYP3A54P-201ENST00000566950 75 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 MIR548Z-201ENST00000584743 97 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 MIR6818-201ENST00000621576 65 ntBASIC-1.73□□□□□ -2.69
HMGB1P1B2RPK0 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 RNA5SP292-201ENST00000390974 118 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 RNA5SP266-201ENST00000410273 108 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 RNU4-61P-201ENST00000411243 107 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 MTATP6P29-201ENST00000415057 132 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.74□□□□□ -2.69
HMGB1P1B2RPK0 SNORA2.1-201ENST00000363089 137 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms