Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC125388.1-201ENST00000459631 156 ntBASIC0.77□□□□□ -2.29
CGB1A6NKQ9 RNA5SP102-201ENST00000516865 106 ntBASIC0.77□□□□□ -2.29
CGB1A6NKQ9 SNORD113.1-201ENST00000363280 73 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 RNU6-800P-201ENST00000384473 103 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CGB1A6NKQ9 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 AC069503.3-201ENST00000618674 145 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 AL162376.1-201ENST00000624117 175 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 AC073869.9-201ENST00000641610 120 ntBASIC0.76□□□□□ -2.29
CGB1A6NKQ9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 SNORD114-4-201ENST00000363962 75 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 Y_RNA.340-201ENST00000365330 92 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 RNU6-260P-201ENST00000384092 107 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 MIR7-2-201ENST00000384970 110 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
CGB1A6NKQ9 RNA5SP484-201ENST00000458857 111 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 SNORD42B-201ENST00000458893 67 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 RNA5SP268-201ENST00000516828 124 ntBASIC0.75□□□□□ -2.29
CGB1A6NKQ9 SNORA36.1-201ENST00000363424 132 ntBASIC0.74□□□□□ -2.29
CGB1A6NKQ9 MIR203A-201ENST00000384836 110 ntBASIC0.74□□□□□ -2.29
CGB1A6NKQ9 MIR489-201ENST00000384923 84 ntBASIC0.74□□□□□ -2.29
CGB1A6NKQ9 RNA5SP94-201ENST00000516917 108 ntBASIC0.74□□□□□ -2.29
CGB1A6NKQ9 Y_RNA.386-201ENST00000383913 105 ntBASIC0.73□□□□□ -2.29
CGB1A6NKQ9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.73□□□□□ -2.29
CGB1A6NKQ9 MIR3657-201ENST00000584818 117 ntBASIC0.73□□□□□ -2.29
CGB1A6NKQ9 SNORA2.1-201ENST00000363089 137 ntBASIC0.72□□□□□ -2.29
CGB1A6NKQ9 SNORA25.4-201ENST00000363666 124 ntBASIC0.72□□□□□ -2.29
CGB1A6NKQ9 Y_RNA.443-201ENST00000384135 111 ntBASIC0.72□□□□□ -2.29
CGB1A6NKQ9 RNU6-630P-201ENST00000391258 106 ntBASIC0.72□□□□□ -2.29
CGB1A6NKQ9 MTND4LP1-201ENST00000446263 157 ntBASIC0.72□□□□□ -2.29
CGB1A6NKQ9 RNU6-471P-201ENST00000383944 106 ntBASIC0.71□□□□□ -2.3
CGB1A6NKQ9 SNORD116-24-201ENST00000384549 92 ntBASIC0.71□□□□□ -2.3
CGB1A6NKQ9 AC005520.4-201ENST00000604337 90 ntBASIC0.71□□□□□ -2.3
CGB1A6NKQ9 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
CGB1A6NKQ9 SNORD114-22-201ENST00000365423 72 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 SNORD110-201ENST00000408189 75 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 MIR1265-201ENST00000408444 86 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 AC006210.1-201ENST00000424882 111 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
CGB1A6NKQ9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
CGB1A6NKQ9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CGB1A6NKQ9 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 RNU6-982P-201ENST00000516216 102 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
CGB1A6NKQ9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 RNU6-668P-201ENST00000364180 107 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 MIR3973-201ENST00000579824 107 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
CGB1A6NKQ9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CGB1A6NKQ9 RNU6-990P-201ENST00000364385 104 ntBASIC0.67□□□□□ -2.3
CGB1A6NKQ9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.67□□□□□ -2.3
CGB1A6NKQ9 RNU6-645P-201ENST00000364649 106 ntBASIC0.67□□□□□ -2.3
CGB1A6NKQ9 MIR140-201ENST00000385282 100 ntBASIC0.67□□□□□ -2.3
CGB1A6NKQ9 RNA5SP480-201ENST00000516840 109 ntBASIC0.67□□□□□ -2.3
CGB1A6NKQ9 MIR373-201ENST00000362273 69 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 RNA5SP147-201ENST00000516493 109 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 AC092634.7-201ENST00000621022 103 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 MIR6739-201ENST00000622461 75 ntBASIC0.66□□□□□ -2.3
CGB1A6NKQ9 SNORD114-2-201ENST00000363953 78 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 RNY1P8-201ENST00000383970 114 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 MIR598-201ENST00000384868 97 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 SNORA40.17-201ENST00000517256 115 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 MIR5706-201ENST00000579841 80 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 MIR4473-201ENST00000583731 91 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 AC103706.3-201ENST00000636297 85 ntBASIC0.65□□□□□ -2.31
CGB1A6NKQ9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.64□□□□□ -2.31
CGB1A6NKQ9 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
CGB1A6NKQ9 RPS29P1-201ENST00000465274 159 ntBASIC0.64□□□□□ -2.31
CGB1A6NKQ9 MIR4511-201ENST00000582784 87 ntBASIC0.64□□□□□ -2.31
CGB1A6NKQ9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
CGB1A6NKQ9 MIR96-201ENST00000362288 78 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 MIR652-201ENST00000385278 98 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 SNORA70.25-201ENST00000612741 95 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 MIR6857-201ENST00000613267 93 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 uc_338.10-201ENST00000621872 182 ntBASIC0.63□□□□□ -2.31
CGB1A6NKQ9 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 MIR521-2-201ENST00000384818 87 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 MIR520E-201ENST00000384867 87 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 AC021146.9-201ENST00000512503 156 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 RNU6-656P-201ENST00000516785 107 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 MIR4752-201ENST00000579672 72 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 MIR548AE1-201ENST00000583292 70 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
CGB1A6NKQ9 RNA5SP215-201ENST00000363440 122 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 318.2 ms