Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 RNU6-164P-201ENST00000364604 103 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 MIR507-201ENST00000385234 94 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.78□□□□□ -2.69
TVP23AA6NH52 RNU7-197P-201ENST00000458836 62 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 RNA5SP147-201ENST00000516493 109 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 CYP3A54P-201ENST00000566950 75 ntBASIC-1.78□□□□□ -2.69
TVP23AA6NH52 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.79□□□□□ -2.7
TVP23AA6NH52 MIR1263-201ENST00000408324 86 ntBASIC-1.79□□□□□ -2.7
TVP23AA6NH52 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.79□□□□□ -2.7
TVP23AA6NH52 AP002795.1-201ENST00000534879 84 ntBASIC-1.79□□□□□ -2.7
TVP23AA6NH52 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 RNU6-915P-201ENST00000364943 103 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 RNU6-260P-201ENST00000384092 107 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 MIR548U-201ENST00000390728 81 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 RNU6-816P-201ENST00000390914 107 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 AL353691.2-201ENST00000443795 59 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.8□□□□□ -2.7
TVP23AA6NH52 SNORA2.1-201ENST00000363089 137 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 RNU6-412P-201ENST00000516434 106 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 AC044792.1-201ENST00000593294 196 ntBASIC-1.81□□□□□ -2.7
TVP23AA6NH52 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 RNU6-80P-201ENST00000384195 107 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 AL117187.1-201ENST00000555482 181 ntBASIC-1.82□□□□□ -2.7
TVP23AA6NH52 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 MIR203A-201ENST00000384836 110 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 SNORD90-201ENST00000391145 111 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 AL078595.1-201ENST00000404458 226 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 MIR3064-201ENST00000581130 66 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 AC072026.1-201ENST00000605023 201 ntBASIC-1.83□□□□□ -2.7
TVP23AA6NH52 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.84□□□□□ -2.7
TVP23AA6NH52 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.84□□□□□ -2.7
TVP23AA6NH52 RNU6-382P-201ENST00000365181 106 ntBASIC-1.84□□□□□ -2.7
TVP23AA6NH52 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.84□□□□□ -2.7
TVP23AA6NH52 RNU4-11P-201ENST00000365287 132 ntBASIC-1.85□□□□□ -2.71
TVP23AA6NH52 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.85□□□□□ -2.71
TVP23AA6NH52 RNU6-540P-201ENST00000384622 101 ntBASIC-1.85□□□□□ -2.71
TVP23AA6NH52 SNORD19-201ENST00000391191 68 ntBASIC-1.85□□□□□ -2.71
TVP23AA6NH52 AP001340.1-201ENST00000624405 217 ntBASIC-1.85□□□□□ -2.71
TVP23AA6NH52 RNU6-151P-201ENST00000364158 107 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 SNORD114-3-201ENST00000364969 75 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 MIR519A2-201ENST00000384990 87 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 RNU6-460P-201ENST00000391158 108 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 AL513043.2-201ENST00000573941 143 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 MIR4694-201ENST00000578534 80 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 MIR4439-201ENST00000583746 80 ntBASIC-1.86□□□□□ -2.71
TVP23AA6NH52 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.87□□□□□ -2.71
TVP23AA6NH52 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.87□□□□□ -2.71
TVP23AA6NH52 RPL35AP4-201ENST00000412007 102 ntBASIC-1.87□□□□□ -2.71
TVP23AA6NH52 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.87□□□□□ -2.71
TVP23AA6NH52 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 MIR577-201ENST00000385196 96 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 AC090616.4-201ENST00000448026 115 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 RNU6-732P-201ENST00000516033 103 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 RNU7-154P-201ENST00000516194 62 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 RNU6-111P-201ENST00000517179 105 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 MIR3128-201ENST00000581957 66 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 MIR3657-201ENST00000584818 117 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 AC104996.3-201ENST00000590718 94 ntBASIC-1.88□□□□□ -2.71
TVP23AA6NH52 RNU6-774P-201ENST00000363238 107 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 AL158147.1-201ENST00000443970 75 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 RNU6-62P-201ENST00000516526 102 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 AC022559.1-201ENST00000520905 205 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 MIR6509-201ENST00000614603 85 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 MIR5683-201ENST00000636514 76 ntBASIC-1.89□□□□□ -2.71
TVP23AA6NH52 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 RNA5SP86-201ENST00000390869 98 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 SNORA81.3-201ENST00000517283 198 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 MIR548AG1-201ENST00000579932 66 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 AC006254.2-201ENST00000603259 279 ntBASIC-1.9□□□□□ -2.71
TVP23AA6NH52 RNY4P27-201ENST00000363341 96 ntBASIC-1.91□□□□□ -2.72
TVP23AA6NH52 RNU6-824P-201ENST00000363724 104 ntBASIC-1.91□□□□□ -2.72
TVP23AA6NH52 SNORA20.1-201ENST00000364790 130 ntBASIC-1.91□□□□□ -2.72
TVP23AA6NH52 RNA5SP292-201ENST00000390974 118 ntBASIC-1.91□□□□□ -2.72
TVP23AA6NH52 RNU6-644P-201ENST00000391155 98 ntBASIC-1.91□□□□□ -2.72
TVP23AA6NH52 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.91□□□□□ -2.72
TVP23AA6NH52 RNU7-88P-201ENST00000458752 63 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms