Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 SCARNA18B-201ENST00000458806 135 ntBASIC-1.49□□□□□ -2.65
SMCO2A6NFE2 MIR4503-201ENST00000582187 83 ntBASIC-1.49□□□□□ -2.65
SMCO2A6NFE2 MIR4306-201ENST00000583390 91 ntBASIC-1.49□□□□□ -2.65
SMCO2A6NFE2 MIR3140-201ENST00000583685 90 ntBASIC-1.49□□□□□ -2.65
SMCO2A6NFE2 RNY3P2-201ENST00000362918 102 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 SNORD64-201ENST00000386683 67 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 MIR548U-201ENST00000390728 81 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 AC140658.3-201ENST00000567603 271 ntBASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.5□□□□□ -2.65
SMCO2A6NFE2 RNU6-990P-201ENST00000364385 104 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 MIR601-201ENST00000385256 79 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 RNU6-644P-201ENST00000391155 98 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 AC068339.1-201ENST00000526965 141 ntBASIC-1.51□□□□□ -2.65
SMCO2A6NFE2 SNORD18.2-201ENST00000459604 70 ntBASIC-1.52□□□□□ -2.65
SMCO2A6NFE2 MIR3613-201ENST00000579844 87 ntBASIC-1.52□□□□□ -2.65
SMCO2A6NFE2 AC104996.3-201ENST00000590718 94 ntBASIC-1.52□□□□□ -2.65
SMCO2A6NFE2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.52□□□□□ -2.65
SMCO2A6NFE2 RNU6-200P-201ENST00000364743 107 ntBASIC-1.53□□□□□ -2.65
SMCO2A6NFE2 MIR1468-201ENST00000410600 86 ntBASIC-1.53□□□□□ -2.65
SMCO2A6NFE2 SNORD4B-201ENST00000459083 72 ntBASIC-1.53□□□□□ -2.65
SMCO2A6NFE2 MIR4464-201ENST00000580818 92 ntBASIC-1.53□□□□□ -2.65
SMCO2A6NFE2 MIR382-201ENST00000637119 76 ntBASIC-1.53□□□□□ -2.65
SMCO2A6NFE2 SNORD116-18-201ENST00000383961 92 ntBASIC-1.54□□□□□ -2.66
SMCO2A6NFE2 MIR569-201ENST00000385228 96 ntBASIC-1.54□□□□□ -2.66
SMCO2A6NFE2 AC021146.9-201ENST00000512503 156 ntBASIC-1.54□□□□□ -2.66
SMCO2A6NFE2 RNU6-327P-201ENST00000516270 127 ntBASIC-1.54□□□□□ -2.66
SMCO2A6NFE2 RNU6-62P-201ENST00000516526 102 ntBASIC-1.54□□□□□ -2.66
SMCO2A6NFE2 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.55□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.55□□□□□ -2.66
SMCO2A6NFE2 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.55□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.55□□□□□ -2.66
SMCO2A6NFE2 MIR548A1-201ENST00000385041 97 ntBASIC-1.55□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.56□□□□□ -2.66
SMCO2A6NFE2 RNA5SP180-201ENST00000516181 101 ntBASIC-1.56□□□□□ -2.66
SMCO2A6NFE2 AL035470.1-201ENST00000622571 220 ntBASIC-1.56□□□□□ -2.66
SMCO2A6NFE2 U6.96-201ENST00000636425 70 ntBASIC-1.56□□□□□ -2.66
SMCO2A6NFE2 RNU6-208P-201ENST00000362431 107 ntBASIC-1.57□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.57□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.57□□□□□ -2.66
SMCO2A6NFE2 MIR124-2-201ENST00000385081 109 ntBASIC-1.57□□□□□ -2.66
SMCO2A6NFE2 AC090617.8-201ENST00000623339 167 ntBASIC-1.57□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.58□□□□□ -2.66
SMCO2A6NFE2 RNU6-813P-201ENST00000384691 107 ntBASIC-1.58□□□□□ -2.66
SMCO2A6NFE2 MTND3P2-201ENST00000438452 342 ntBASIC-1.58□□□□□ -2.66
SMCO2A6NFE2 MIR198-201ENST00000637333 62 ntBASIC-1.58□□□□□ -2.66
SMCO2A6NFE2 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.59□□□□□ -2.66
SMCO2A6NFE2 SNORD45B-201ENST00000364617 72 ntBASIC-1.59□□□□□ -2.66
SMCO2A6NFE2 RNU6-196P-201ENST00000384315 107 ntBASIC-1.59□□□□□ -2.66
SMCO2A6NFE2 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.59□□□□□ -2.66
SMCO2A6NFE2 AL353803.5-201ENST00000599815 141 ntBASIC-1.59□□□□□ -2.66
SMCO2A6NFE2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.6□□□□□ -2.67
SMCO2A6NFE2 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.6□□□□□ -2.67
SMCO2A6NFE2 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.6□□□□□ -2.67
SMCO2A6NFE2 AC103810.7-201ENST00000607821 91 ntBASIC-1.6□□□□□ -2.67
SMCO2A6NFE2 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.61□□□□□ -2.67
SMCO2A6NFE2 MIR3144-201ENST00000579460 79 ntBASIC-1.61□□□□□ -2.67
SMCO2A6NFE2 AC004792.1-201ENST00000614523 137 ntBASIC-1.61□□□□□ -2.67
SMCO2A6NFE2 AL445584.3-201ENST00000617173 78 ntBASIC-1.61□□□□□ -2.67
SMCO2A6NFE2 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.62□□□□□ -2.67
SMCO2A6NFE2 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.62□□□□□ -2.67
SMCO2A6NFE2 RNU6-706P-201ENST00000517229 104 ntBASIC-1.62□□□□□ -2.67
SMCO2A6NFE2 AC006254.2-201ENST00000603259 279 ntBASIC-1.62□□□□□ -2.67
SMCO2A6NFE2 MIR6888-201ENST00000621977 67 ntBASIC-1.62□□□□□ -2.67
SMCO2A6NFE2 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 RNU6-260P-201ENST00000384092 107 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 RNU6-804P-201ENST00000384286 107 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 RNA5SP292-201ENST00000390974 118 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 SNORD90-201ENST00000391145 111 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 MIR1285-2-201ENST00000408311 88 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 snoU13.17-201ENST00000458802 104 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 RNU6-158P-201ENST00000517104 100 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 MIR548Z-201ENST00000584743 97 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 U4.2-201ENST00000618561 85 ntBASIC-1.63□□□□□ -2.67
SMCO2A6NFE2 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.64□□□□□ -2.67
SMCO2A6NFE2 RNU6-382P-201ENST00000365181 106 ntBASIC-1.64□□□□□ -2.67
SMCO2A6NFE2 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.65□□□□□ -2.67
SMCO2A6NFE2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
SMCO2A6NFE2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.65□□□□□ -2.67
SMCO2A6NFE2 RNU6-772P-201ENST00000516042 105 ntBASIC-1.65□□□□□ -2.67
SMCO2A6NFE2 RNU6-379P-201ENST00000363813 104 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 RNU6-574P-201ENST00000384265 107 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 SNORA18.5-201ENST00000516616 101 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 MIR5009-201ENST00000578736 100 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 MIR4777-201ENST00000583710 86 ntBASIC-1.66□□□□□ -2.68
SMCO2A6NFE2 MIR365A-201ENST00000362260 87 ntBASIC-1.67□□□□□ -2.68
SMCO2A6NFE2 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.67□□□□□ -2.68
SMCO2A6NFE2 RNU6-463P-201ENST00000384340 107 ntBASIC-1.67□□□□□ -2.68
SMCO2A6NFE2 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.67□□□□□ -2.68
SMCO2A6NFE2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.67□□□□□ -2.68
SMCO2A6NFE2 RNU6-519P-201ENST00000410590 108 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 1865.3 ms