Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-816P-201ENST00000390914 107 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR1302-6-201ENST00000408466 90 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 SNORA19.1-201ENST00000410656 129 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 U7.5-201ENST00000517224 61 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR3121-201ENST00000579680 77 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR4795-201ENST00000584182 89 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR577-201ENST00000385196 96 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 RNA5SP86-201ENST00000390869 98 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 SNORD37.2-201ENST00000391075 66 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 SNORD4B-201ENST00000459083 72 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-168P-201ENST00000516189 101 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 AC006254.2-201ENST00000603259 279 ntBASIC-1.58□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-246P-201ENST00000384702 107 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-918P-201ENST00000391219 106 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-875P-201ENST00000516488 106 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-988P-201ENST00000519081 107 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 U6atac.1-201ENST00000616025 117 ntBASIC-1.59□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.6□□□□□ -2.67
TRAV1-1A0A0B4J248 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.6□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR3613-201ENST00000579844 87 ntBASIC-1.6□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR4490-201ENST00000582647 84 ntBASIC-1.6□□□□□ -2.67
TRAV1-1A0A0B4J248 MTND4P29-201ENST00000503122 1372 ntBASIC-1.6□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-238P-201ENST00000363313 106 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR548H1-201ENST00000408610 102 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR548I1-201ENST00000408810 149 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 MTND2P23-201ENST00000422990 651 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 SNORA18.5-201ENST00000516616 101 ntBASIC-1.61□□□□□ -2.67
TRAV1-1A0A0B4J248 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.62□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR521-2-201ENST00000384818 87 ntBASIC-1.62□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-460P-201ENST00000391158 108 ntBASIC-1.62□□□□□ -2.67
TRAV1-1A0A0B4J248 MTND3P2-201ENST00000438452 342 ntBASIC-1.62□□□□□ -2.67
TRAV1-1A0A0B4J248 AL691482.2-201ENST00000457453 84 ntBASIC-1.62□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR487B-201ENST00000385021 84 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 RNA5SP136-201ENST00000410906 107 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-781P-201ENST00000516377 101 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-62P-201ENST00000516526 102 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.63□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-704P-201ENST00000364162 103 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-713P-201ENST00000384761 107 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 RBMX2P4-201ENST00000441256 376 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU7-121P-201ENST00000516604 62 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR548Z-201ENST00000584743 97 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 AC103810.7-201ENST00000607821 91 ntBASIC-1.64□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-312P-201ENST00000364629 107 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-915P-201ENST00000364943 103 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-239P-201ENST00000390990 99 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 MTATP6P29-201ENST00000415057 132 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 MIR8062-201ENST00000621515 85 ntBASIC-1.65□□□□□ -2.67
TRAV1-1A0A0B4J248 RNU6-832P-201ENST00000363319 107 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-540P-201ENST00000384622 101 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU2-38P-201ENST00000410856 79 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 RNA5SP272-201ENST00000516095 111 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 MIR4694-201ENST00000578534 80 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.66□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-644P-201ENST00000391155 98 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 MIR548Q-201ENST00000408404 100 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-519P-201ENST00000410590 108 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 AC018880.2-201ENST00000414265 201 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU7-197P-201ENST00000458836 62 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 AC022559.1-201ENST00000520905 205 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 AC130289.1-201ENST00000577321 73 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 MIR6739-201ENST00000622461 75 ntBASIC-1.67□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.68□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.68□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-985P-201ENST00000410182 104 ntBASIC-1.68□□□□□ -2.68
TRAV1-1A0A0B4J248 AL021921.1-201ENST00000442774 93 ntBASIC-1.68□□□□□ -2.68
TRAV1-1A0A0B4J248 U6.81-201ENST00000612550 106 ntBASIC-1.68□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU5F-1-201ENST00000362507 117 ntBASIC-1.69□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.69□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.69□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-400P-201ENST00000391173 106 ntBASIC-1.69□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.69□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-79P-201ENST00000362511 107 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 SNORD18.1-201ENST00000363807 70 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-478P-201ENST00000363904 110 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU4-11P-201ENST00000365287 132 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 MTATP8P1-201ENST00000467115 207 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-635P-201ENST00000516651 102 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 AC141273.2-201ENST00000618989 130 ntBASIC-1.7□□□□□ -2.68
TRAV1-1A0A0B4J248 U6.104-201ENST00000637979 90 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms