Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MIR3140-201ENST00000583685 90 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 AC080013.6-201ENST00000606185 215 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 FTX_4.1-201ENST00000616291 147 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 MTND4LP32-201ENST00000636111 270 ntBASIC-2.75□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-563P-201ENST00000364872 108 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 SNORD115-31-201ENST00000365318 82 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 MIR1302-11-201ENST00000408051 138 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 MIR1302-9-201ENST00000408365 138 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 MIR1302-10-201ENST00000408734 138 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-101P-201ENST00000410323 104 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 MIR1302-2-201ENST00000607096 138 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.76□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-608P-201ENST00000383927 104 ntBASIC-2.77□□□□□ -2.85
HLA-DRB4X5D2U9 SNORA24B-201ENST00000384176 131 ntBASIC-2.77□□□□□ -2.85
HLA-DRB4X5D2U9 MIR3163-201ENST00000581592 73 ntBASIC-2.77□□□□□ -2.85
HLA-DRB4X5D2U9 AL137067.1-201ENST00000615933 120 ntBASIC-2.77□□□□□ -2.85
HLA-DRB4X5D2U9 MIR3974-201ENST00000637126 96 ntBASIC-2.77□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-818P-201ENST00000364837 108 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-260P-201ENST00000384092 107 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-651P-201ENST00000411040 105 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 RNU6-976P-201ENST00000516086 111 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 RNA5SP147-201ENST00000516493 109 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 AC092794.1-201ENST00000612734 582 ntBASIC-2.78□□□□□ -2.85
HLA-DRB4X5D2U9 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.79□□□□□ -2.86
HLA-DRB4X5D2U9 RNY3P14-201ENST00000384309 102 ntBASIC-2.79□□□□□ -2.86
HLA-DRB4X5D2U9 SNORD116-29-201ENST00000384516 83 ntBASIC-2.79□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 RNU7-88P-201ENST00000458752 63 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 snoU13.10-201ENST00000459301 103 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 AC120024.2-201ENST00000576526 175 ntBASIC-2.8□□□□□ -2.86
HLA-DRB4X5D2U9 RNY4P9-201ENST00000363194 97 ntBASIC-2.81□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.81□□□□□ -2.86
HLA-DRB4X5D2U9 U7.5-201ENST00000517224 61 ntBASIC-2.81□□□□□ -2.86
HLA-DRB4X5D2U9 AC006254.2-201ENST00000603259 279 ntBASIC-2.81□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-766P-201ENST00000362478 107 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 AL035461.1-201ENST00000421490 332 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 SNORA40.15-201ENST00000516884 107 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 AC021753.1-201ENST00000635724 168 ntBASIC-2.82□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 SNORD116-2-201ENST00000384274 95 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 MIR548U-201ENST00000390728 81 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.83□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-132P-201ENST00000383863 107 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 MIR519A2-201ENST00000384990 87 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 MT-TI-201ENST00000387365 69 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 AC002553.4-201ENST00000616896 331 ntBASIC-2.84□□□□□ -2.86
HLA-DRB4X5D2U9 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 SNORD116-1-201ENST00000384335 95 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 MIR548Q-201ENST00000408404 100 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 MIR23C-201ENST00000579846 100 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.85□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-508P-201ENST00000363231 103 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 SNORD50.2-201ENST00000365465 70 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 SNORD18B-201ENST00000365659 72 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-246P-201ENST00000384702 107 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 MIR4282-201ENST00000583613 67 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 AL132765.2-201ENST00000610812 351 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 U4.5-201ENST00000617137 123 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 AC025521.1-201ENST00000621624 286 ntBASIC-2.86□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-363P-201ENST00000362895 105 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-382P-201ENST00000365181 106 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 RNU6-768P-201ENST00000384683 107 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 MIR759-201ENST00000390224 91 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 MIR1277-201ENST00000408536 78 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 MTND1P29-201ENST00000448112 647 ntBASIC-2.87□□□□□ -2.87
HLA-DRB4X5D2U9 RNU7-85P-201ENST00000458851 63 ntBASIC-2.87□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 283 ms