Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RNA5SP136-201ENST00000410906 107 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 AC068339.1-201ENST00000526965 141 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 AC025521.1-201ENST00000621624 286 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 MIR3658-201ENST00000636291 56 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.87□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 SNORA24B-201ENST00000384176 131 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 MTND2P23-201ENST00000422990 651 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 MIR3171-201ENST00000584270 74 ntBASIC-1.88□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 AC022028.1-201ENST00000412054 408 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 RNU7-85P-201ENST00000458851 63 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 AC130289.1-201ENST00000577321 73 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 MIR3140-201ENST00000583685 90 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 MIR198-201ENST00000637333 62 ntBASIC-1.89□□□□□ -2.71
HDGFL3Q9Y3E1 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 MIR548A1-201ENST00000385041 97 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-635P-201ENST00000516651 102 ntBASIC-1.9□□□□□ -2.71
HDGFL3Q9Y3E1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.91□□□□□ -2.72
HDGFL3Q9Y3E1 MIR601-201ENST00000385256 79 ntBASIC-1.92□□□□□ -2.72
HDGFL3Q9Y3E1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.92□□□□□ -2.72
HDGFL3Q9Y3E1 AC020661.2-201ENST00000560114 134 ntBASIC-1.92□□□□□ -2.72
HDGFL3Q9Y3E1 MIR6818-201ENST00000621576 65 ntBASIC-1.92□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 MIR548U-201ENST00000390728 81 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 RNU2-38P-201ENST00000410856 79 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 MIR4770-201ENST00000579149 58 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 MIR6129-201ENST00000616087 109 ntBASIC-1.93□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-238P-201ENST00000363313 106 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 MIR1263-201ENST00000408324 86 ntBASIC-1.94□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.95□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.95□□□□□ -2.72
HDGFL3Q9Y3E1 MIR889-201ENST00000401280 79 ntBASIC-1.95□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.95□□□□□ -2.72
HDGFL3Q9Y3E1 MIR3064-201ENST00000581130 66 ntBASIC-1.95□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 MIR527-201ENST00000385244 85 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-816P-201ENST00000390914 107 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 AL513043.2-201ENST00000573941 143 ntBASIC-1.96□□□□□ -2.72
HDGFL3Q9Y3E1 SNORA33.2-201ENST00000365413 134 ntBASIC-1.97□□□□□ -2.72
HDGFL3Q9Y3E1 RNU6-639P-201ENST00000384074 107 ntBASIC-1.97□□□□□ -2.72
HDGFL3Q9Y3E1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.97□□□□□ -2.72
HDGFL3Q9Y3E1 snoU13.17-201ENST00000458802 104 ntBASIC-1.97□□□□□ -2.72
HDGFL3Q9Y3E1 MIR548S-201ENST00000581352 82 ntBASIC-1.97□□□□□ -2.72
HDGFL3Q9Y3E1 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 RNY4P6-201ENST00000363667 96 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-260P-201ENST00000384092 107 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 MIR1255B2-201ENST00000408618 67 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 AC104996.3-201ENST00000590718 94 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.98□□□□□ -2.73
HDGFL3Q9Y3E1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.99□□□□□ -2.73
HDGFL3Q9Y3E1 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.99□□□□□ -2.73
HDGFL3Q9Y3E1 RNU7-197P-201ENST00000458836 62 ntBASIC-1.99□□□□□ -2.73
HDGFL3Q9Y3E1 MTATP8P1-201ENST00000467115 207 ntBASIC-1.99□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-915P-201ENST00000364943 103 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 SNORA33.1-201ENST00000364957 130 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 MIR1468-201ENST00000410600 86 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 RNA5SP180-201ENST00000516181 101 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 RNU4-71P-201ENST00000516258 113 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 AC006254.2-201ENST00000603259 279 ntBASIC-2□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.01□□□□□ -2.73
HDGFL3Q9Y3E1 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.01□□□□□ -2.73
HDGFL3Q9Y3E1 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.01□□□□□ -2.73
HDGFL3Q9Y3E1 MIR577-201ENST00000385196 96 ntBASIC-2.01□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.02□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-62P-201ENST00000516526 102 ntBASIC-2.02□□□□□ -2.73
HDGFL3Q9Y3E1 CYP3A54P-201ENST00000566950 75 ntBASIC-2.02□□□□□ -2.73
HDGFL3Q9Y3E1 MIR6502-201ENST00000617296 76 ntBASIC-2.02□□□□□ -2.73
HDGFL3Q9Y3E1 RNU6-382P-201ENST00000365181 106 ntBASIC-2.03□□□□□ -2.73
HDGFL3Q9Y3E1 MIR1285-2-201ENST00000408311 88 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 284.9 ms