Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 MIR573-201ENST00000384964 99 ntBASIC1.39□□□□□ -2.19
TRIM33Q9UPN9 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
TRIM33Q9UPN9 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
TRIM33Q9UPN9 MIR6509-201ENST00000614603 85 ntBASIC1.39□□□□□ -2.19
TRIM33Q9UPN9 RNU6-726P-201ENST00000364680 107 ntBASIC1.38□□□□□ -2.19
TRIM33Q9UPN9 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
TRIM33Q9UPN9 RNA5SP458-201ENST00000516188 119 ntBASIC1.38□□□□□ -2.19
TRIM33Q9UPN9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM33Q9UPN9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 RNU6V-201ENST00000384105 107 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 MT-TY-201ENST00000387409 66 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 MIR548L-201ENST00000408303 86 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 AC025627.3-201ENST00000582078 182 ntBASIC1.37□□□□□ -2.19
TRIM33Q9UPN9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
TRIM33Q9UPN9 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
TRIM33Q9UPN9 MIR3678-201ENST00000578455 94 ntBASIC1.36□□□□□ -2.19
TRIM33Q9UPN9 MIR3612-201ENST00000579753 87 ntBASIC1.36□□□□□ -2.19
TRIM33Q9UPN9 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
TRIM33Q9UPN9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.35□□□□□ -2.19
TRIM33Q9UPN9 AC073869.9-201ENST00000641610 120 ntBASIC1.35□□□□□ -2.19
TRIM33Q9UPN9 MIR7-2-201ENST00000384970 110 ntBASIC1.34□□□□□ -2.19
TRIM33Q9UPN9 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
TRIM33Q9UPN9 MIR4460-201ENST00000577862 86 ntBASIC1.34□□□□□ -2.19
TRIM33Q9UPN9 MIR4511-201ENST00000582784 87 ntBASIC1.34□□□□□ -2.19
TRIM33Q9UPN9 AC103706.3-201ENST00000636297 85 ntBASIC1.34□□□□□ -2.19
TRIM33Q9UPN9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 SNORD42B-201ENST00000458893 67 ntBASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 MIR3657-201ENST00000584818 117 ntBASIC1.33□□□□□ -2.2
TRIM33Q9UPN9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 RNU1-141P-201ENST00000364623 158 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 SNORA8.2-201ENST00000384372 139 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 MIR203A-201ENST00000384836 110 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 MTND4LP1-201ENST00000446263 157 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 RNU6-982P-201ENST00000516216 102 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TRIM33Q9UPN9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 RNU6-716P-201ENST00000365621 103 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 RNU6-260P-201ENST00000384092 107 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 RNA5SP255-201ENST00000516370 107 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 MIR6828-201ENST00000636181 60 ntBASIC1.31□□□□□ -2.2
TRIM33Q9UPN9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRIM33Q9UPN9 RNU6-269P-201ENST00000391077 97 ntBASIC1.3□□□□□ -2.2
TRIM33Q9UPN9 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
TRIM33Q9UPN9 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
TRIM33Q9UPN9 SNORA2.1-201ENST00000363089 137 ntBASIC1.29□□□□□ -2.2
TRIM33Q9UPN9 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
TRIM33Q9UPN9 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
TRIM33Q9UPN9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.28□□□□□ -2.2
TRIM33Q9UPN9 RNU4-45P-201ENST00000365469 141 ntBASIC1.28□□□□□ -2.2
TRIM33Q9UPN9 AL162376.1-201ENST00000624117 175 ntBASIC1.28□□□□□ -2.2
TRIM33Q9UPN9 SNORD114-4-201ENST00000363962 75 ntBASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 RNU6-668P-201ENST00000364180 107 ntBASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 AL603825.1-201ENST00000438481 80 ntBASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 AC069503.3-201ENST00000618674 145 ntBASIC1.27□□□□□ -2.21
TRIM33Q9UPN9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.26□□□□□ -2.21
TRIM33Q9UPN9 MIR18A-201ENST00000362310 71 ntBASIC1.25□□□□□ -2.21
TRIM33Q9UPN9 RNU6-669P-201ENST00000365575 107 ntBASIC1.25□□□□□ -2.21
TRIM33Q9UPN9 MIR9-2-201ENST00000384838 87 ntBASIC1.25□□□□□ -2.21
TRIM33Q9UPN9 RNA5SP484-201ENST00000458857 111 ntBASIC1.25□□□□□ -2.21
TRIM33Q9UPN9 SNORA40.17-201ENST00000517256 115 ntBASIC1.25□□□□□ -2.21
TRIM33Q9UPN9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM33Q9UPN9 RNU6-645P-201ENST00000364649 106 ntBASIC1.24□□□□□ -2.21
TRIM33Q9UPN9 SNORD99-201ENST00000408612 74 ntBASIC1.24□□□□□ -2.21
TRIM33Q9UPN9 AL109933.3-201ENST00000619095 188 ntBASIC1.24□□□□□ -2.21
TRIM33Q9UPN9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM33Q9UPN9 RNU6-990P-201ENST00000364385 104 ntBASIC1.23□□□□□ -2.21
TRIM33Q9UPN9 Y_RNA.250-201ENST00000364542 110 ntBASIC1.23□□□□□ -2.21
TRIM33Q9UPN9 Y_RNA.375-201ENST00000365625 101 ntBASIC1.23□□□□□ -2.21
TRIM33Q9UPN9 RNA5SP227-201ENST00000516184 113 ntBASIC1.23□□□□□ -2.21
TRIM33Q9UPN9 AC011195.1-201ENST00000578177 177 ntBASIC1.23□□□□□ -2.21
TRIM33Q9UPN9 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
TRIM33Q9UPN9 AC110620.1-201ENST00000416042 228 ntBASIC1.22□□□□□ -2.21
TRIM33Q9UPN9 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
TRIM33Q9UPN9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.22□□□□□ -2.21
TRIM33Q9UPN9 MIR6739-201ENST00000622461 75 ntBASIC1.22□□□□□ -2.21
TRIM33Q9UPN9 SNORA36.1-201ENST00000363424 132 ntBASIC1.21□□□□□ -2.22
TRIM33Q9UPN9 AP1B1P2-201ENST00000416196 106 ntBASIC1.21□□□□□ -2.22
TRIM33Q9UPN9 RNU6-542P-201ENST00000516405 103 ntBASIC1.21□□□□□ -2.22
TRIM33Q9UPN9 AC018659.1-201ENST00000551083 169 ntBASIC1.21□□□□□ -2.22
TRIM33Q9UPN9 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
TRIM33Q9UPN9 RNA5SP268-201ENST00000516828 124 ntBASIC1.19□□□□□ -2.22
TRIM33Q9UPN9 RNA5SP94-201ENST00000516917 108 ntBASIC1.19□□□□□ -2.22
TRIM33Q9UPN9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.19□□□□□ -2.22
TRIM33Q9UPN9 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
TRIM33Q9UPN9 RNA5SP147-201ENST00000516493 109 ntBASIC1.18□□□□□ -2.22
TRIM33Q9UPN9 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 256.8 ms