Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-495P-201ENST00000362995 107 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 SNORD115-22-201ENST00000364456 82 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 SNORD45A-201ENST00000384512 84 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 RNU6-663P-201ENST00000391105 106 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 MIR1265-201ENST00000408444 86 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 AC244098.3-201ENST00000424803 96 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 RNU6-469P-201ENST00000516253 101 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 U6.111-201ENST00000636093 83 ntBASIC1.33□□□□□ -2.2
AP4E1Q9UPM8 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
AP4E1Q9UPM8 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
AP4E1Q9UPM8 RNA5SP47-201ENST00000517230 109 ntBASIC1.32□□□□□ -2.2
AP4E1Q9UPM8 MIR499A-201ENST00000384903 122 ntBASIC1.31□□□□□ -2.2
AP4E1Q9UPM8 RNU6-604P-201ENST00000390917 100 ntBASIC1.31□□□□□ -2.2
AP4E1Q9UPM8 AC093423.1-201ENST00000440817 142 ntBASIC1.31□□□□□ -2.2
AP4E1Q9UPM8 MIR8053-201ENST00000613344 75 ntBASIC1.31□□□□□ -2.2
AP4E1Q9UPM8 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 SNORD45.1-201ENST00000363181 77 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 RNU6-726P-201ENST00000364680 107 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 RNU6-54P-201ENST00000365563 107 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 NAMPTP3-201ENST00000569273 224 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 MIR3612-201ENST00000579753 87 ntBASIC1.3□□□□□ -2.2
AP4E1Q9UPM8 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
AP4E1Q9UPM8 RNU7-74P-201ENST00000459104 62 ntBASIC1.29□□□□□ -2.2
AP4E1Q9UPM8 RNU6-881P-201ENST00000516813 102 ntBASIC1.29□□□□□ -2.2
AP4E1Q9UPM8 MIR3678-201ENST00000578455 94 ntBASIC1.29□□□□□ -2.2
AP4E1Q9UPM8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
AP4E1Q9UPM8 RNU6-800P-201ENST00000384473 103 ntBASIC1.28□□□□□ -2.2
AP4E1Q9UPM8 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
AP4E1Q9UPM8 MIR8070-201ENST00000616510 88 ntBASIC1.28□□□□□ -2.2
AP4E1Q9UPM8 Y_RNA.340-201ENST00000365330 92 ntBASIC1.27□□□□□ -2.21
AP4E1Q9UPM8 RNU6-1039P-201ENST00000383931 107 ntBASIC1.27□□□□□ -2.21
AP4E1Q9UPM8 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
AP4E1Q9UPM8 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
AP4E1Q9UPM8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
AP4E1Q9UPM8 RNU6V-201ENST00000384105 107 ntBASIC1.26□□□□□ -2.21
AP4E1Q9UPM8 AL691482.2-201ENST00000457453 84 ntBASIC1.26□□□□□ -2.21
AP4E1Q9UPM8 SNORD42B-201ENST00000458893 67 ntBASIC1.26□□□□□ -2.21
AP4E1Q9UPM8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.26□□□□□ -2.21
AP4E1Q9UPM8 SNORD113.1-201ENST00000363280 73 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 RNU6-716P-201ENST00000365621 103 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 RNU6-895P-201ENST00000384125 103 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 SNORD116-24-201ENST00000384549 92 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 MT-TY-201ENST00000387409 66 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 MIR548L-201ENST00000408303 86 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 AC125388.1-201ENST00000459631 156 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 AC005520.4-201ENST00000604337 90 ntBASIC1.25□□□□□ -2.21
AP4E1Q9UPM8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
AP4E1Q9UPM8 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
AP4E1Q9UPM8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.24□□□□□ -2.21
AP4E1Q9UPM8 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
AP4E1Q9UPM8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
AP4E1Q9UPM8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.23□□□□□ -2.21
AP4E1Q9UPM8 Y_RNA.443-201ENST00000384135 111 ntBASIC1.23□□□□□ -2.21
AP4E1Q9UPM8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
AP4E1Q9UPM8 MIR6509-201ENST00000614603 85 ntBASIC1.23□□□□□ -2.21
AP4E1Q9UPM8 MIR6828-201ENST00000636181 60 ntBASIC1.23□□□□□ -2.21
AP4E1Q9UPM8 RNU1-141P-201ENST00000364623 158 ntBASIC1.22□□□□□ -2.21
AP4E1Q9UPM8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
AP4E1Q9UPM8 RNU6-269P-201ENST00000391077 97 ntBASIC1.22□□□□□ -2.21
AP4E1Q9UPM8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 RNU6-392P-201ENST00000364926 101 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 RNU6-471P-201ENST00000383944 106 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 MIR4460-201ENST00000577862 86 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 AL162376.1-201ENST00000624117 175 ntBASIC1.21□□□□□ -2.22
AP4E1Q9UPM8 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 RNU6-1216P-201ENST00000362590 107 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 SNORA25.4-201ENST00000363666 124 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 SNORA8.2-201ENST00000384372 139 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 MIR203A-201ENST00000384836 110 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 RNU6-630P-201ENST00000391258 106 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 SNORA40.17-201ENST00000517256 115 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 MIR7111-201ENST00000619751 72 ntBASIC1.2□□□□□ -2.22
AP4E1Q9UPM8 SNORA36.1-201ENST00000363424 132 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 RNA5SP484-201ENST00000458857 111 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 RNU6-982P-201ENST00000516216 102 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 AC011195.1-201ENST00000578177 177 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 MIR3657-201ENST00000584818 117 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
AP4E1Q9UPM8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
AP4E1Q9UPM8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.18□□□□□ -2.22
AP4E1Q9UPM8 AC073869.9-201ENST00000641610 120 ntBASIC1.18□□□□□ -2.22
AP4E1Q9UPM8 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
AP4E1Q9UPM8 snoU13.18-201ENST00000459483 104 ntBASIC1.17□□□□□ -2.22
AP4E1Q9UPM8 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
AP4E1Q9UPM8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
AP4E1Q9UPM8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.16□□□□□ -2.22
AP4E1Q9UPM8 SNORA2.1-201ENST00000363089 137 ntBASIC1.15□□□□□ -2.23
AP4E1Q9UPM8 RNU6-990P-201ENST00000364385 104 ntBASIC1.15□□□□□ -2.23
AP4E1Q9UPM8 RNU4-45P-201ENST00000365469 141 ntBASIC1.15□□□□□ -2.23
AP4E1Q9UPM8 MIR7-2-201ENST00000384970 110 ntBASIC1.15□□□□□ -2.23
AP4E1Q9UPM8 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
AP4E1Q9UPM8 AC069503.3-201ENST00000618674 145 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms