Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 U3.27-201ENST00000391237 200 ntBASIC0.74□□□□□ -2.29
DDX41Q9UJV9 RNU2-59P-201ENST00000410482 191 ntBASIC0.74□□□□□ -2.29
DDX41Q9UJV9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.74□□□□□ -2.29
DDX41Q9UJV9 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
DDX41Q9UJV9 MIR450A2-201ENST00000385022 100 ntBASIC0.73□□□□□ -2.29
DDX41Q9UJV9 RNU6-863P-201ENST00000515989 104 ntBASIC0.73□□□□□ -2.29
DDX41Q9UJV9 RNA5SP292-201ENST00000390974 118 ntBASIC0.72□□□□□ -2.29
DDX41Q9UJV9 Y_RNA.593-201ENST00000410292 98 ntBASIC0.72□□□□□ -2.29
DDX41Q9UJV9 RNA5SP193-201ENST00000410353 107 ntBASIC0.72□□□□□ -2.29
DDX41Q9UJV9 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
DDX41Q9UJV9 RNA5SP457-201ENST00000363657 124 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 AC069271.1-201ENST00000445577 156 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 AC093729.1-201ENST00000513074 128 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 RNU6-267P-201ENST00000516714 103 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 MIR4796-201ENST00000580742 81 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
DDX41Q9UJV9 SNORD115-27-201ENST00000364430 82 ntBASIC0.7□□□□□ -2.3
DDX41Q9UJV9 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
DDX41Q9UJV9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.7□□□□□ -2.3
DDX41Q9UJV9 RNU1-141P-201ENST00000364623 158 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 RNU6-820P-201ENST00000384273 107 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 FGF7P7-201ENST00000514120 227 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 MIR4460-201ENST00000577862 86 ntBASIC0.69□□□□□ -2.3
DDX41Q9UJV9 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
DDX41Q9UJV9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
DDX41Q9UJV9 MIR548BB-201ENST00000626714 66 ntBASIC0.68□□□□□ -2.3
DDX41Q9UJV9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
DDX41Q9UJV9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 AC006210.1-201ENST00000424882 111 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU6-848P-201ENST00000515948 107 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU6-617P-201ENST00000516147 107 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU6-473P-201ENST00000516164 107 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU7-153P-201ENST00000516455 62 ntBASIC0.67□□□□□ -2.3
DDX41Q9UJV9 RNU5F-1-201ENST00000362507 117 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 SNORA63.2-201ENST00000362603 126 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 RNA5SP484-201ENST00000458857 111 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 RNA5SP330-201ENST00000517096 96 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 NAMPTP3-201ENST00000569273 224 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 MIR5706-201ENST00000579841 80 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 U7.6-201ENST00000610841 64 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
DDX41Q9UJV9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.65□□□□□ -2.31
DDX41Q9UJV9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.65□□□□□ -2.31
DDX41Q9UJV9 Y_RNA.426-201ENST00000384068 113 ntBASIC0.65□□□□□ -2.31
DDX41Q9UJV9 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
DDX41Q9UJV9 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
DDX41Q9UJV9 MIR494-201ENST00000349529 81 ntBASIC0.64□□□□□ -2.31
DDX41Q9UJV9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.64□□□□□ -2.31
DDX41Q9UJV9 AC093423.1-201ENST00000440817 142 ntBASIC0.64□□□□□ -2.31
DDX41Q9UJV9 SNORA25.13-201ENST00000516395 103 ntBASIC0.64□□□□□ -2.31
DDX41Q9UJV9 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
DDX41Q9UJV9 RNU6-242P-201ENST00000384359 107 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 RNU6-719P-201ENST00000516671 104 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 AC069503.3-201ENST00000618674 145 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 AC006160.2-201ENST00000637708 154 ntBASIC0.63□□□□□ -2.31
DDX41Q9UJV9 SNORD73B-201ENST00000364394 72 ntBASIC0.62□□□□□ -2.31
DDX41Q9UJV9 RNU6-497P-201ENST00000365316 104 ntBASIC0.62□□□□□ -2.31
DDX41Q9UJV9 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
DDX41Q9UJV9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.62□□□□□ -2.31
DDX41Q9UJV9 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
DDX41Q9UJV9 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
DDX41Q9UJV9 MT-TY-201ENST00000387409 66 ntBASIC0.61□□□□□ -2.31
DDX41Q9UJV9 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
DDX41Q9UJV9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
DDX41Q9UJV9 MIR330-201ENST00000362196 94 ntBASIC0.6□□□□□ -2.31
DDX41Q9UJV9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
DDX41Q9UJV9 MIR5588-201ENST00000581890 63 ntBASIC0.6□□□□□ -2.31
DDX41Q9UJV9 MIR548O2-201ENST00000616090 70 ntBASIC0.6□□□□□ -2.31
DDX41Q9UJV9 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 Y_RNA.73-201ENST00000362910 113 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 AC022137.1-201ENST00000483735 151 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 RNU6-762P-201ENST00000517107 102 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 MIR3140-201ENST00000583685 90 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.31
DDX41Q9UJV9 AC090625.1-201ENST00000357130 210 ntBASIC0.58□□□□□ -2.32
DDX41Q9UJV9 YWHAEP2-201ENST00000580066 112 ntBASIC0.58□□□□□ -2.32
DDX41Q9UJV9 SNORA70.25-201ENST00000612741 95 ntBASIC0.58□□□□□ -2.32
DDX41Q9UJV9 SNORA26.2-201ENST00000390922 122 ntBASIC0.57□□□□□ -2.32
DDX41Q9UJV9 MIR1302-4-201ENST00000408701 150 ntBASIC0.57□□□□□ -2.32
DDX41Q9UJV9 AL450471.1-201ENST00000447509 127 ntBASIC0.57□□□□□ -2.32
DDX41Q9UJV9 AC140658.3-201ENST00000567603 271 ntBASIC0.57□□□□□ -2.32
DDX41Q9UJV9 AL109933.3-201ENST00000619095 188 ntBASIC0.57□□□□□ -2.32
DDX41Q9UJV9 Y_RNA.607-201ENST00000410597 98 ntBASIC0.56□□□□□ -2.32
DDX41Q9UJV9 Y_RNA.264-201ENST00000364665 102 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 RNU6-979P-201ENST00000383896 107 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 RNU6V-201ENST00000384105 107 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 MIR760-201ENST00000390220 80 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 AC062037.1-201ENST00000605302 128 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
DDX41Q9UJV9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.54□□□□□ -2.32
DDX41Q9UJV9 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 1370.4 ms