Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
NCKIPSDQ9NZQ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-315P-201ENST00000362666 107 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 SNORA36.1-201ENST00000363424 132 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-652P-201ENST00000365488 107 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-129P-201ENST00000391022 107 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 U3.27-201ENST00000391237 200 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU7-74P-201ENST00000459104 62 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU7-104P-201ENST00000459398 79 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNA5SP436-201ENST00000516020 115 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-287P-201ENST00000516230 98 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 MIR3920-201ENST00000581751 86 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 AC244669.1-204ENST00000621564 178 ntBASIC0.68□□□□□ -2.3
NCKIPSDQ9NZQ3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 Y_RNA.313-201ENST00000365095 103 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-279P-201ENST00000391297 101 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 MIR1255A-201ENST00000408338 113 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 RNA5SP395-201ENST00000516567 118 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 RNA5SP94-201ENST00000516917 108 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.67□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU5F-1-201ENST00000362507 117 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 SNORA63.2-201ENST00000362603 126 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 RNU6-380P-201ENST00000410207 107 ntBASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.66□□□□□ -2.3
NCKIPSDQ9NZQ3 MIR617-201ENST00000385030 97 ntBASIC0.65□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
NCKIPSDQ9NZQ3 SNORD77.2-201ENST00000391045 68 ntBASIC0.65□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR2113-201ENST00000459007 91 ntBASIC0.65□□□□□ -2.31
NCKIPSDQ9NZQ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.65□□□□□ -2.31
NCKIPSDQ9NZQ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-686P-201ENST00000364839 107 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR451A-201ENST00000385059 72 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR548L-201ENST00000408303 86 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-638P-201ENST00000516582 104 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR4712-201ENST00000583750 82 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR6828-201ENST00000636181 60 ntBASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.64□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-208P-201ENST00000362431 107 ntBASIC0.63□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-726P-201ENST00000364680 107 ntBASIC0.63□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-24P-201ENST00000384440 107 ntBASIC0.63□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
NCKIPSDQ9NZQ3 AL450471.1-201ENST00000447509 127 ntBASIC0.63□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 Y_RNA.94-201ENST00000363068 106 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR193B-201ENST00000384907 83 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-857P-201ENST00000515893 110 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 AC010487.4-201ENST00000637027 61 ntBASIC0.62□□□□□ -2.31
NCKIPSDQ9NZQ3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-161P-201ENST00000363051 106 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-478P-201ENST00000363904 110 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU2-59P-201ENST00000410482 191 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR548AG2-201ENST00000581228 64 ntBASIC0.61□□□□□ -2.31
NCKIPSDQ9NZQ3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 SNORA24B-201ENST00000384176 131 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR519E-201ENST00000385075 84 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 SNORD90-201ENST00000391145 111 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 RNA5SP225-201ENST00000410874 135 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 AC097510.1-201ENST00000510945 133 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR7107-201ENST00000611489 80 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR1297-201ENST00000637311 77 ntBASIC0.6□□□□□ -2.31
NCKIPSDQ9NZQ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 RNA5SP325-201ENST00000363756 130 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 snoU13.17-201ENST00000458802 104 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR1273G-201ENST00000577677 100 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 YWHAEP2-201ENST00000580066 112 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 YWHAEP3-201ENST00000582767 121 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR3140-201ENST00000583685 90 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
NCKIPSDQ9NZQ3 RNU6-681P-201ENST00000364012 104 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 RNU6-716P-201ENST00000365621 103 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 RNU6-719P-201ENST00000516671 104 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 RNU6-807P-201ENST00000516805 107 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 AL162376.1-201ENST00000624117 175 ntBASIC0.58□□□□□ -2.32
NCKIPSDQ9NZQ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NCKIPSDQ9NZQ3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.57□□□□□ -2.32
NCKIPSDQ9NZQ3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.57□□□□□ -2.32
NCKIPSDQ9NZQ3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 218.7 ms