Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL162376.1-201ENST00000624117 175 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 AC006160.2-201ENST00000637708 154 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 MIR494-201ENST00000349529 81 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.388-201ENST00000383919 113 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 RNU6-1152P-201ENST00000384576 107 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 MIR519C-201ENST00000385053 87 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 MIR519E-201ENST00000385075 84 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 RNY4P29-201ENST00000410801 97 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 RNU1-29P-201ENST00000606574 126 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.51□□□□□ -2.33
DDX43Q9NXZ2 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.491-201ENST00000384417 107 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 MIR617-201ENST00000385030 97 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 MIR1236-201ENST00000408340 102 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 RNU6-935P-201ENST00000410371 100 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 MIR5588-201ENST00000581890 63 ntBASIC0.5□□□□□ -2.33
DDX43Q9NXZ2 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 RNY1P1-201ENST00000364372 112 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.239-201ENST00000364444 113 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 RNU6-820P-201ENST00000384273 107 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 MIR548U-201ENST00000390728 81 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 RNU6-269P-201ENST00000391077 97 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 MIR1302-4-201ENST00000408701 150 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 RNU6-592P-201ENST00000411333 103 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 AC022137.1-201ENST00000483735 151 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 AC140658.3-201ENST00000567603 271 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 MIR4796-201ENST00000580742 81 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.49□□□□□ -2.33
DDX43Q9NXZ2 SNORA24B-201ENST00000384176 131 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 RNA5SP227-201ENST00000516184 113 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 RNA5SP330-201ENST00000517096 96 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 IGLL4P-201ENST00000614590 133 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 RNU6-624P-201ENST00000363411 107 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.611-201ENST00000410682 108 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 RNU7-171P-201ENST00000459581 62 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 AC093729.1-201ENST00000513074 128 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 SNORA25.13-201ENST00000516395 103 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.47□□□□□ -2.33
DDX43Q9NXZ2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 RNU6-1051P-201ENST00000365471 102 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 RNU6-787P-201ENST00000384032 107 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 MIR451A-201ENST00000385059 72 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 SNORA26.2-201ENST00000390922 122 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 MIR3140-201ENST00000583685 90 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
DDX43Q9NXZ2 SNORA63.2-201ENST00000362603 126 ntBASIC0.45□□□□□ -2.34
DDX43Q9NXZ2 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
DDX43Q9NXZ2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.45□□□□□ -2.34
DDX43Q9NXZ2 RNU1-141P-201ENST00000364623 158 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 U3.27-201ENST00000391237 200 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 MIR548L-201ENST00000408303 86 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 snoU13.17-201ENST00000458802 104 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 RNA5SP484-201ENST00000458857 111 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
DDX43Q9NXZ2 RNU6-1276P-201ENST00000365372 104 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 Y_RNA.607-201ENST00000410597 98 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 RNU7-74P-201ENST00000459104 62 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 MIR4666B-201ENST00000578142 81 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 SNORA70.25-201ENST00000612741 95 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 MIR548O2-201ENST00000616090 70 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 AL109933.3-201ENST00000619095 188 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 MIR6755-201ENST00000619993 66 ntBASIC0.43□□□□□ -2.34
DDX43Q9NXZ2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 RNU6-478P-201ENST00000363904 110 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 RNA5SP173-201ENST00000364857 136 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 RNU6-573P-201ENST00000383938 106 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 Y_RNA.426-201ENST00000384068 113 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 MT-TY-201ENST00000387409 66 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
DDX43Q9NXZ2 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
DDX43Q9NXZ2 RNU2-59P-201ENST00000410482 191 ntBASIC0.41□□□□□ -2.34
DDX43Q9NXZ2 RNU6-1052P-201ENST00000411398 104 ntBASIC0.41□□□□□ -2.34
DDX43Q9NXZ2 FGF7P7-201ENST00000514120 227 ntBASIC0.41□□□□□ -2.34
DDX43Q9NXZ2 RNU6-719P-201ENST00000516671 104 ntBASIC0.41□□□□□ -2.34
DDX43Q9NXZ2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 SNORD115-37-201ENST00000363768 82 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 Y_RNA.316-201ENST00000365118 111 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 AL450471.1-201ENST00000447509 127 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 RNU6-557P-201ENST00000516842 110 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 NAMPTP3-201ENST00000569273 224 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 AC073869.9-201ENST00000641610 120 ntBASIC0.4□□□□□ -2.35
DDX43Q9NXZ2 MIR216B-201ENST00000390186 82 ntBASIC0.39□□□□□ -2.35
DDX43Q9NXZ2 RNU6-863P-201ENST00000515989 104 ntBASIC0.39□□□□□ -2.35
DDX43Q9NXZ2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms