Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 AC093423.1-201ENST00000440817 142 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 SNORD115-27-201ENST00000364430 82 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 RNU1-141P-201ENST00000364623 158 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 RNU6-219P-201ENST00000364728 107 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 MIR451A-201ENST00000385059 72 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 RNU6-863P-201ENST00000515989 104 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 SNORA18.5-201ENST00000516616 101 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 NAMPTP3-201ENST00000569273 224 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 SNORA70.25-201ENST00000612741 95 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 MIR6755-201ENST00000619993 66 ntBASIC0.49□□□□□ -2.33
TDP1Q9NUW8 RNU6-1134P-201ENST00000365156 101 ntBASIC0.48□□□□□ -2.33
TDP1Q9NUW8 MIR1236-201ENST00000408340 102 ntBASIC0.48□□□□□ -2.33
TDP1Q9NUW8 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
TDP1Q9NUW8 RNU6-633P-201ENST00000362612 103 ntBASIC0.47□□□□□ -2.33
TDP1Q9NUW8 Y_RNA.369-201ENST00000365568 117 ntBASIC0.47□□□□□ -2.33
TDP1Q9NUW8 RNU6-267P-201ENST00000516714 103 ntBASIC0.47□□□□□ -2.33
TDP1Q9NUW8 AC006210.1-201ENST00000424882 111 ntBASIC0.46□□□□□ -2.34
TDP1Q9NUW8 Y_RNA.17-201ENST00000362433 111 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 RNU6-294P-201ENST00000364999 102 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 SNORA2A-201ENST00000383885 135 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 MIR519C-201ENST00000385053 87 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 SNORD110-201ENST00000408189 75 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 RNU6-848P-201ENST00000515948 107 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 RNU6-617P-201ENST00000516147 107 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 RNU6-473P-201ENST00000516164 107 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.45□□□□□ -2.34
TDP1Q9NUW8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 Y_RNA.593-201ENST00000410292 98 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 FGF7P7-201ENST00000514120 227 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 RNU7-153P-201ENST00000516455 62 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 MIR4460-201ENST00000577862 86 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 MIR5706-201ENST00000579841 80 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 MIR924-201ENST00000638017 53 ntBASIC0.44□□□□□ -2.34
TDP1Q9NUW8 RNU6-675P-201ENST00000384236 104 ntBASIC0.43□□□□□ -2.34
TDP1Q9NUW8 SNORD90-201ENST00000391145 111 ntBASIC0.43□□□□□ -2.34
TDP1Q9NUW8 U3.27-201ENST00000391237 200 ntBASIC0.43□□□□□ -2.34
TDP1Q9NUW8 MIR4796-201ENST00000580742 81 ntBASIC0.43□□□□□ -2.34
TDP1Q9NUW8 RNU6-497P-201ENST00000365316 104 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 RNU6-1051P-201ENST00000365471 102 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 RNU6-719P-201ENST00000516671 104 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 MIR3140-201ENST00000583685 90 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 AC069503.3-201ENST00000618674 145 ntBASIC0.42□□□□□ -2.34
TDP1Q9NUW8 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
TDP1Q9NUW8 SNORA63.2-201ENST00000362603 126 ntBASIC0.41□□□□□ -2.34
TDP1Q9NUW8 MT-TY-201ENST00000387409 66 ntBASIC0.41□□□□□ -2.34
TDP1Q9NUW8 MIR548O2-201ENST00000616090 70 ntBASIC0.41□□□□□ -2.34
TDP1Q9NUW8 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
TDP1Q9NUW8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
TDP1Q9NUW8 YWHAEP2-201ENST00000580066 112 ntBASIC0.4□□□□□ -2.35
TDP1Q9NUW8 RNU6-1255P-201ENST00000363434 112 ntBASIC0.39□□□□□ -2.35
TDP1Q9NUW8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.39□□□□□ -2.35
TDP1Q9NUW8 MIR548BB-201ENST00000626714 66 ntBASIC0.39□□□□□ -2.35
TDP1Q9NUW8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
TDP1Q9NUW8 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 Y_RNA.43-201ENST00000362670 111 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 SNORD115-37-201ENST00000363768 82 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNY4P3-201ENST00000365254 95 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNA5SP128-201ENST00000365305 116 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 HMGN2P22-201ENST00000427588 175 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNA5SP330-201ENST00000517096 96 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 U7.6-201ENST00000610841 64 ntBASIC0.38□□□□□ -2.35
TDP1Q9NUW8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TDP1Q9NUW8 RNU6V-201ENST00000384105 107 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 AC093729.1-201ENST00000513074 128 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 RNU7-129P-201ENST00000516128 62 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 IGLL4P-201ENST00000614590 133 ntBASIC0.37□□□□□ -2.35
TDP1Q9NUW8 RNY1P1-201ENST00000364372 112 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 SNORA24B-201ENST00000384176 131 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 Y_RNA.611-201ENST00000410682 108 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 AC108740.1-201ENST00000498629 225 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 SNORA25.13-201ENST00000516395 103 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 MIR4473-201ENST00000583731 91 ntBASIC0.36□□□□□ -2.35
TDP1Q9NUW8 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
TDP1Q9NUW8 Y_RNA.73-201ENST00000362910 113 ntBASIC0.35□□□□□ -2.35
TDP1Q9NUW8 Y_RNA.125-201ENST00000363371 111 ntBASIC0.35□□□□□ -2.35
TDP1Q9NUW8 RNA5SP457-201ENST00000363657 124 ntBASIC0.35□□□□□ -2.35
TDP1Q9NUW8 AC069113.3-201ENST00000521019 150 ntBASIC0.35□□□□□ -2.35
TDP1Q9NUW8 RNU5F-1-201ENST00000362507 117 ntBASIC0.34□□□□□ -2.36
TDP1Q9NUW8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.34□□□□□ -2.36
TDP1Q9NUW8 RNU6-54P-201ENST00000365563 107 ntBASIC0.34□□□□□ -2.36
TDP1Q9NUW8 MIR499B-201ENST00000636498 73 ntBASIC0.34□□□□□ -2.36
TDP1Q9NUW8 MIR450A2-201ENST00000385022 100 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1567.2 ms