Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 YWHAEP2-201ENST00000580066 112 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 YWHAEP3-201ENST00000582767 121 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 AC067863.3-201ENST00000624172 122 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
PDLIM7Q9NR12 Y_RNA.30-201ENST00000362572 97 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 Y_RNA.371-201ENST00000365591 113 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 RNU6-135P-201ENST00000516769 101 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 RNU6-807P-201ENST00000516805 107 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 RNU6-303P-201ENST00000517091 106 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
PDLIM7Q9NR12 SNORA24B-201ENST00000384176 131 ntBASIC1.14□□□□□ -2.23
PDLIM7Q9NR12 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
PDLIM7Q9NR12 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
PDLIM7Q9NR12 MIR4639-201ENST00000584938 69 ntBASIC1.14□□□□□ -2.23
PDLIM7Q9NR12 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
PDLIM7Q9NR12 Y_RNA.565-201ENST00000384719 101 ntBASIC1.13□□□□□ -2.23
PDLIM7Q9NR12 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PDLIM7Q9NR12 MIR3678-201ENST00000578455 94 ntBASIC1.13□□□□□ -2.23
PDLIM7Q9NR12 MIR1297-201ENST00000637311 77 ntBASIC1.13□□□□□ -2.23
PDLIM7Q9NR12 SNORD18A-201ENST00000363753 72 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 RNU6-340P-201ENST00000364005 107 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 U3.27-201ENST00000391237 200 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 AC097510.1-201ENST00000510945 133 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 MIR3134-201ENST00000579433 74 ntBASIC1.12□□□□□ -2.23
PDLIM7Q9NR12 MIR617-201ENST00000385030 97 ntBASIC1.11□□□□□ -2.23
PDLIM7Q9NR12 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
PDLIM7Q9NR12 AC074348.1-201ENST00000426503 132 ntBASIC1.11□□□□□ -2.23
PDLIM7Q9NR12 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
PDLIM7Q9NR12 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.11□□□□□ -2.23
PDLIM7Q9NR12 RNU6-824P-201ENST00000363724 104 ntBASIC1.1□□□□□ -2.23
PDLIM7Q9NR12 RNU2-59P-201ENST00000410482 191 ntBASIC1.1□□□□□ -2.23
PDLIM7Q9NR12 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
PDLIM7Q9NR12 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
PDLIM7Q9NR12 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
PDLIM7Q9NR12 Y_RNA.545-201ENST00000384652 105 ntBASIC1.09□□□□□ -2.23
PDLIM7Q9NR12 MIR519E-201ENST00000385075 84 ntBASIC1.09□□□□□ -2.23
PDLIM7Q9NR12 RNU6-1177P-201ENST00000391058 104 ntBASIC1.09□□□□□ -2.23
PDLIM7Q9NR12 MIR548L-201ENST00000408303 86 ntBASIC1.09□□□□□ -2.23
PDLIM7Q9NR12 RNA5SP47-201ENST00000517230 109 ntBASIC1.09□□□□□ -2.23
PDLIM7Q9NR12 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PDLIM7Q9NR12 SNORD41.1-201ENST00000391000 69 ntBASIC1.08□□□□□ -2.24
PDLIM7Q9NR12 Y_RNA.606-201ENST00000410579 103 ntBASIC1.08□□□□□ -2.24
PDLIM7Q9NR12 U6.81-201ENST00000612550 106 ntBASIC1.08□□□□□ -2.24
PDLIM7Q9NR12 MIR664A-201ENST00000626086 82 ntBASIC1.08□□□□□ -2.24
PDLIM7Q9NR12 RNU6-330P-201ENST00000363015 107 ntBASIC1.07□□□□□ -2.24
PDLIM7Q9NR12 RNU6-716P-201ENST00000365621 103 ntBASIC1.07□□□□□ -2.24
PDLIM7Q9NR12 RNU6-154P-201ENST00000384306 106 ntBASIC1.07□□□□□ -2.24
PDLIM7Q9NR12 AC244098.3-201ENST00000424803 96 ntBASIC1.07□□□□□ -2.24
PDLIM7Q9NR12 RNU6-70P-201ENST00000516438 60 ntBASIC1.07□□□□□ -2.24
PDLIM7Q9NR12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 RNU6-681P-201ENST00000364012 104 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 RNU6-726P-201ENST00000364680 107 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 RNU6-411P-201ENST00000384451 107 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 AC073261.1-201ENST00000429409 121 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 RNU6-523P-201ENST00000516304 54 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 Y_RNA.681-201ENST00000516445 113 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 MIR4714-201ENST00000580728 77 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 MIR4773-1-201ENST00000637203 78 ntBASIC1.06□□□□□ -2.24
PDLIM7Q9NR12 Y_RNA.258-201ENST00000364613 105 ntBASIC1.05□□□□□ -2.24
PDLIM7Q9NR12 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
PDLIM7Q9NR12 MIR216B-201ENST00000390186 82 ntBASIC1.05□□□□□ -2.24
PDLIM7Q9NR12 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
PDLIM7Q9NR12 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.05□□□□□ -2.24
PDLIM7Q9NR12 RNU6-382P-201ENST00000365181 106 ntBASIC1.04□□□□□ -2.24
PDLIM7Q9NR12 SNORA8.1-201ENST00000384250 140 ntBASIC1.04□□□□□ -2.24
PDLIM7Q9NR12 RNU7-74P-201ENST00000459104 62 ntBASIC1.04□□□□□ -2.24
PDLIM7Q9NR12 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
PDLIM7Q9NR12 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
PDLIM7Q9NR12 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.24
PDLIM7Q9NR12 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PDLIM7Q9NR12 MIR548O2-201ENST00000616090 70 ntBASIC1.03□□□□□ -2.24
PDLIM7Q9NR12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PDLIM7Q9NR12 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
PDLIM7Q9NR12 RNU6-1015P-201ENST00000517121 99 ntBASIC1.02□□□□□ -2.25
PDLIM7Q9NR12 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
PDLIM7Q9NR12 MIR1273G-201ENST00000577677 100 ntBASIC1.02□□□□□ -2.25
PDLIM7Q9NR12 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PDLIM7Q9NR12 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
PDLIM7Q9NR12 SNORA36.1-201ENST00000363424 132 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 RNU6-54P-201ENST00000365563 107 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
PDLIM7Q9NR12 RNU6-269P-201ENST00000391077 97 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 AC093423.1-201ENST00000440817 142 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 RNU6-274P-201ENST00000459566 107 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 RNA5SP227-201ENST00000516184 113 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 RNU6-687P-201ENST00000516443 89 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
PDLIM7Q9NR12 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms