Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.04□□□□□ -2.74
TREM1Q9NP99 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.04□□□□□ -2.74
TREM1Q9NP99 SNORA33.1-201ENST00000364957 130 ntBASIC-2.05□□□□□ -2.74
TREM1Q9NP99 RPL35AP4-201ENST00000412007 102 ntBASIC-2.05□□□□□ -2.74
TREM1Q9NP99 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.05□□□□□ -2.74
TREM1Q9NP99 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.05□□□□□ -2.74
TREM1Q9NP99 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 RNY4P20-201ENST00000516678 93 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 RNU7-6P-201ENST00000516845 62 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 MIR3140-201ENST00000583685 90 ntBASIC-2.06□□□□□ -2.74
TREM1Q9NP99 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 RNU6-806P-201ENST00000365147 105 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.07□□□□□ -2.74
TREM1Q9NP99 FGF7P4-201ENST00000509595 295 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 CYP3A54P-201ENST00000566950 75 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 MIR1255B1-201ENST00000636325 63 ntBASIC-2.07□□□□□ -2.74
TREM1Q9NP99 RNU6-194P-201ENST00000363862 105 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 MIR548A1-201ENST00000385041 97 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 AC018880.2-201ENST00000414265 201 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.08□□□□□ -2.74
TREM1Q9NP99 MIR4723-201ENST00000585070 81 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 U2.14-201ENST00000615943 113 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 MIR5683-201ENST00000636514 76 ntBASIC-2.08□□□□□ -2.74
TREM1Q9NP99 SNORD38.1-201ENST00000363863 68 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 MT-TM-201ENST00000387377 68 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 RNU6-695P-201ENST00000391157 104 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 SNORD19-201ENST00000391191 68 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 SNORA7.5-201ENST00000410672 110 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 snoU13.17-201ENST00000458802 104 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 RNA5SP147-201ENST00000516493 109 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 MIR4490-201ENST00000582647 84 ntBASIC-2.09□□□□□ -2.74
TREM1Q9NP99 SNORA63.2-201ENST00000362603 126 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 RNU6-841P-201ENST00000383872 107 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 MT-TI-201ENST00000387365 69 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 SNORD54-201ENST00000459159 67 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 MIR548AM-201ENST00000584298 74 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 AL512310.12-203ENST00000640543 90 ntBASIC-2.1□□□□□ -2.75
TREM1Q9NP99 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 RNU6-508P-201ENST00000363231 103 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 RNU7-24P-201ENST00000458867 62 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.11□□□□□ -2.75
TREM1Q9NP99 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.12□□□□□ -2.75
TREM1Q9NP99 SNORA24B-201ENST00000384176 131 ntBASIC-2.12□□□□□ -2.75
TREM1Q9NP99 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.12□□□□□ -2.75
TREM1Q9NP99 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.12□□□□□ -2.75
TREM1Q9NP99 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.12□□□□□ -2.75
TREM1Q9NP99 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.13□□□□□ -2.75
TREM1Q9NP99 MTND5P22-201ENST00000458380 195 ntBASIC-2.13□□□□□ -2.75
TREM1Q9NP99 RNU6-774P-201ENST00000363238 107 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 RNU6-132P-201ENST00000383863 107 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 RNU6-260P-201ENST00000384092 107 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 MIR519A2-201ENST00000384990 87 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 RNU4-88P-201ENST00000411220 86 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 RNU7-154P-201ENST00000516194 62 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 RNU6-65P-201ENST00000516332 98 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 MIR3123-201ENST00000583417 75 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 MIR4536-1-201ENST00000583537 88 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.14□□□□□ -2.75
TREM1Q9NP99 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.15□□□□□ -2.75
TREM1Q9NP99 RNU6-818P-201ENST00000364837 108 ntBASIC-2.15□□□□□ -2.75
TREM1Q9NP99 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.15□□□□□ -2.75
TREM1Q9NP99 RNU7-88P-201ENST00000458752 63 ntBASIC-2.15□□□□□ -2.75
TREM1Q9NP99 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.15□□□□□ -2.75
TREM1Q9NP99 MIR203A-201ENST00000384836 110 ntBASIC-2.16□□□□□ -2.76
TREM1Q9NP99 AL137067.1-201ENST00000615933 120 ntBASIC-2.16□□□□□ -2.76
TREM1Q9NP99 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.16□□□□□ -2.76
TREM1Q9NP99 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.17□□□□□ -2.76
TREM1Q9NP99 RNU7-85P-201ENST00000458851 63 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 U7.5-201ENST00000517224 61 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 AC025521.1-201ENST00000621624 286 ntBASIC-2.17□□□□□ -2.76
TREM1Q9NP99 RNU6-382P-201ENST00000365181 106 ntBASIC-2.18□□□□□ -2.76
TREM1Q9NP99 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.18□□□□□ -2.76
TREM1Q9NP99 MIR759-201ENST00000390224 91 ntBASIC-2.18□□□□□ -2.76
TREM1Q9NP99 AC021753.1-201ENST00000635724 168 ntBASIC-2.18□□□□□ -2.76
TREM1Q9NP99 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 SNORD50.2-201ENST00000365465 70 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 SNORA19.1-201ENST00000410656 129 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 MIR548AG1-201ENST00000579932 66 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 MIR3163-201ENST00000581592 73 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 U6atac.1-201ENST00000616025 117 ntBASIC-2.2□□□□□ -2.76
TREM1Q9NP99 RNU6-309P-201ENST00000364573 106 ntBASIC-2.21□□□□□ -2.76
TREM1Q9NP99 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.21□□□□□ -2.76
TREM1Q9NP99 RNU6-768P-201ENST00000384683 107 ntBASIC-2.21□□□□□ -2.76
TREM1Q9NP99 RNU6-246P-201ENST00000384702 107 ntBASIC-2.21□□□□□ -2.76
TREM1Q9NP99 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms