Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNORD90-201ENST00000391145 111 ntBASIC-1.27□□□□□ -2.61
LRRC40Q9H9A6 SNORA63.2-201ENST00000362603 126 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-746P-201ENST00000384112 109 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-409P-201ENST00000384114 104 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-239P-201ENST00000390990 99 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNA5SP266-201ENST00000410273 108 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 AC022559.1-201ENST00000520905 205 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 U6.96-201ENST00000636425 70 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 SNORD37.2-201ENST00000391075 66 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 RNU6-460P-201ENST00000391158 108 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR1263-201ENST00000408324 86 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR3064-201ENST00000581130 66 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR4536-1-201ENST00000583537 88 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 AC141273.2-201ENST00000618989 130 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 RNU6-151P-201ENST00000364158 107 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 MIR548F4-201ENST00000408515 105 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 RNU6-65P-201ENST00000516332 98 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 AL513043.2-201ENST00000573941 143 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 MIR4320-201ENST00000636981 65 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 MIR577-201ENST00000385196 96 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 SNORD75.2-201ENST00000408784 58 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU2-51P-201ENST00000410708 197 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 MTCYBP6-201ENST00000441810 138 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU7-24P-201ENST00000458867 62 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 SNORD63.1-201ENST00000516178 80 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-479P-201ENST00000516348 105 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-781P-201ENST00000516377 101 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-915P-201ENST00000364943 103 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 SNORA33.1-201ENST00000364957 130 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 MIR548A1-201ENST00000385041 97 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 snoU13.17-201ENST00000458802 104 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 AC130289.1-201ENST00000577321 73 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 MIR3613-201ENST00000579844 87 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-816P-201ENST00000390914 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 SNORD115-22-201ENST00000364456 82 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 MIR29B1-201ENST00000385015 81 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNA5SP136-201ENST00000410906 107 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 SNORA81.3-201ENST00000517283 198 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 AC104996.3-201ENST00000590718 94 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 AC044792.1-201ENST00000593294 196 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 MIR6818-201ENST00000621576 65 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNU6-382P-201ENST00000365181 106 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP292-201ENST00000390974 118 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 MIR8485-201ENST00000401372 91 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 MIR1255B2-201ENST00000408618 67 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 AC132825.6-201ENST00000638861 357 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU4-11P-201ENST00000365287 132 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 SNORA26.4-201ENST00000391188 123 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP147-201ENST00000516493 109 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 SNORD4B-201ENST00000459083 72 ntBASIC-1.37□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP461-201ENST00000516451 104 ntBASIC-1.37□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP26-201ENST00000362406 119 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-260P-201ENST00000384092 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 MIR203A-201ENST00000384836 110 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU4-71P-201ENST00000516258 113 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-111P-201ENST00000517179 105 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-824P-201ENST00000363724 104 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 AC026421.1-201ENST00000519101 163 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 CYP3A54P-201ENST00000566950 75 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 RNU6-832P-201ENST00000363319 107 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 SNORD115-33-201ENST00000363723 82 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR548U-201ENST00000390728 81 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR4694-201ENST00000578534 80 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR3128-201ENST00000581957 66 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms