Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNORD90-201ENST00000391145 111 ntBASIC-1.27□□□□□ -2.61
LRRC40Q9H9A6 SNORA63.2-201ENST00000362603 126 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-746P-201ENST00000384112 109 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-409P-201ENST00000384114 104 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-239P-201ENST00000390990 99 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNA5SP266-201ENST00000410273 108 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 AC022559.1-201ENST00000520905 205 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 U6.96-201ENST00000636425 70 ntBASIC-1.28□□□□□ -2.61
LRRC40Q9H9A6 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 SNORD37.2-201ENST00000391075 66 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 RNU6-460P-201ENST00000391158 108 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR1263-201ENST00000408324 86 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR3064-201ENST00000581130 66 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 MIR4536-1-201ENST00000583537 88 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 AC141273.2-201ENST00000618989 130 ntBASIC-1.29□□□□□ -2.62
LRRC40Q9H9A6 RNU6-151P-201ENST00000364158 107 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 MIR548F4-201ENST00000408515 105 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 RNU6-65P-201ENST00000516332 98 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 AL513043.2-201ENST00000573941 143 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 MIR4320-201ENST00000636981 65 ntBASIC-1.3□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 MIR577-201ENST00000385196 96 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 SNORD75.2-201ENST00000408784 58 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU2-51P-201ENST00000410708 197 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 MTCYBP6-201ENST00000441810 138 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU7-24P-201ENST00000458867 62 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 SNORD63.1-201ENST00000516178 80 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-479P-201ENST00000516348 105 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 RNU6-781P-201ENST00000516377 101 ntBASIC-1.31□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-915P-201ENST00000364943 103 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 SNORA33.1-201ENST00000364957 130 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 MIR548A1-201ENST00000385041 97 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 snoU13.17-201ENST00000458802 104 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 AC130289.1-201ENST00000577321 73 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 MIR3613-201ENST00000579844 87 ntBASIC-1.32□□□□□ -2.62
LRRC40Q9H9A6 RNU6-816P-201ENST00000390914 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.33□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 SNORD115-22-201ENST00000364456 82 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 MIR29B1-201ENST00000385015 81 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNA5SP136-201ENST00000410906 107 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 SNORA81.3-201ENST00000517283 198 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 AC104996.3-201ENST00000590718 94 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 AC044792.1-201ENST00000593294 196 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 MIR6818-201ENST00000621576 65 ntBASIC-1.34□□□□□ -2.62
LRRC40Q9H9A6 RNU6-382P-201ENST00000365181 106 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP292-201ENST00000390974 118 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 MIR8485-201ENST00000401372 91 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 MIR1255B2-201ENST00000408618 67 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 AC132825.6-201ENST00000638861 357 ntBASIC-1.35□□□□□ -2.63
LRRC40Q9H9A6 RNU4-11P-201ENST00000365287 132 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 SNORA26.4-201ENST00000391188 123 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP147-201ENST00000516493 109 ntBASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.36□□□□□ -2.63
LRRC40Q9H9A6 SNORD4B-201ENST00000459083 72 ntBASIC-1.37□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP461-201ENST00000516451 104 ntBASIC-1.37□□□□□ -2.63
LRRC40Q9H9A6 RNA5SP26-201ENST00000362406 119 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-260P-201ENST00000384092 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 MIR203A-201ENST00000384836 110 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU4-71P-201ENST00000516258 113 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-111P-201ENST00000517179 105 ntBASIC-1.38□□□□□ -2.63
LRRC40Q9H9A6 RNU6-824P-201ENST00000363724 104 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 AC026421.1-201ENST00000519101 163 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 CYP3A54P-201ENST00000566950 75 ntBASIC-1.39□□□□□ -2.63
LRRC40Q9H9A6 RNU6-832P-201ENST00000363319 107 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 SNORD115-33-201ENST00000363723 82 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR548U-201ENST00000390728 81 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR4694-201ENST00000578534 80 ntBASIC-1.4□□□□□ -2.63
LRRC40Q9H9A6 MIR3128-201ENST00000581957 66 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms