Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC002350.1-201ENST00000490759 375 ntBASIC0.91□□□□□ -2.26
EBF3Q9H4W6 Y_RNA.12-201ENST00000362393 112 ntBASIC0.9□□□□□ -2.27
EBF3Q9H4W6 SNORD115-24-201ENST00000363528 82 ntBASIC0.9□□□□□ -2.27
EBF3Q9H4W6 AC139453.2-201ENST00000487255 133 ntBASIC0.9□□□□□ -2.27
EBF3Q9H4W6 MIR3920-201ENST00000581751 86 ntBASIC0.9□□□□□ -2.27
EBF3Q9H4W6 RNU6-824P-201ENST00000363724 104 ntBASIC0.89□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.89□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.264-201ENST00000364665 102 ntBASIC0.89□□□□□ -2.27
EBF3Q9H4W6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
EBF3Q9H4W6 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
EBF3Q9H4W6 RNU6-303P-201ENST00000517091 106 ntBASIC0.88□□□□□ -2.27
EBF3Q9H4W6 YWHAEP2-201ENST00000580066 112 ntBASIC0.88□□□□□ -2.27
EBF3Q9H4W6 YWHAEP3-201ENST00000582767 121 ntBASIC0.88□□□□□ -2.27
EBF3Q9H4W6 RNU5F-1-201ENST00000362507 117 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 RNU6-340P-201ENST00000364005 107 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.371-201ENST00000365591 113 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 RNU6-154P-201ENST00000384306 106 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 RNU6-1015P-201ENST00000517121 99 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.87□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.545-201ENST00000384652 105 ntBASIC0.86□□□□□ -2.27
EBF3Q9H4W6 AC073261.1-201ENST00000429409 121 ntBASIC0.86□□□□□ -2.27
EBF3Q9H4W6 RNU7-104P-201ENST00000459398 79 ntBASIC0.86□□□□□ -2.27
EBF3Q9H4W6 RNU7-13P-201ENST00000516413 62 ntBASIC0.86□□□□□ -2.27
EBF3Q9H4W6 RNU6-687P-201ENST00000516443 89 ntBASIC0.86□□□□□ -2.27
EBF3Q9H4W6 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 Y_RNA.606-201ENST00000410579 103 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
EBF3Q9H4W6 RNU6-70P-201ENST00000516438 60 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 U6.81-201ENST00000612550 106 ntBASIC0.85□□□□□ -2.27
EBF3Q9H4W6 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 SNORD115-44-201ENST00000365391 82 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 MIR519E-201ENST00000385075 84 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 AC097510.1-201ENST00000510945 133 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 MIR6779-201ENST00000617283 64 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 AC244669.1-204ENST00000621564 178 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 MIR1297-201ENST00000637311 77 ntBASIC0.84□□□□□ -2.27
EBF3Q9H4W6 RNY4P3-201ENST00000365254 95 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNA5SP117-201ENST00000365294 118 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNU6-411P-201ENST00000384451 107 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNU6-380P-201ENST00000410207 107 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNU2-59P-201ENST00000410482 191 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNU6-807P-201ENST00000516805 107 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 MIR3612-201ENST00000579753 87 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.83□□□□□ -2.28
EBF3Q9H4W6 RNU6-382P-201ENST00000365181 106 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 MIR617-201ENST00000385030 97 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 MIR3678-201ENST00000578455 94 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 MIR4639-201ENST00000584938 69 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.82□□□□□ -2.28
EBF3Q9H4W6 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
EBF3Q9H4W6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
EBF3Q9H4W6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
EBF3Q9H4W6 AC067863.3-201ENST00000624172 122 ntBASIC0.81□□□□□ -2.28
EBF3Q9H4W6 RNU6-726P-201ENST00000364680 107 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 SNORD115-31-201ENST00000365318 82 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
EBF3Q9H4W6 SNORA8.1-201ENST00000384250 140 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 RNU6-1241P-201ENST00000384536 107 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 SNORD41.1-201ENST00000391000 69 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 U3.27-201ENST00000391237 200 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 AC093423.1-201ENST00000440817 142 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 MIR4773-1-201ENST00000637203 78 ntBASIC0.8□□□□□ -2.28
EBF3Q9H4W6 RNU6-587P-201ENST00000391282 106 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 AC244098.3-201ENST00000424803 96 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 AC114801.3-201ENST00000510231 177 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 NAMPTP3-201ENST00000569273 224 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 MIR548O2-201ENST00000616090 70 ntBASIC0.79□□□□□ -2.28
EBF3Q9H4W6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RNU6-495P-201ENST00000362995 107 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 SNORA36.1-201ENST00000363424 132 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RNU6-54P-201ENST00000365563 107 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RNU6-540P-201ENST00000384622 101 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RNU6-634P-201ENST00000459134 106 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 RN7SL793P-201ENST00000583259 296 ntBASIC0.78□□□□□ -2.28
EBF3Q9H4W6 MIR18A-201ENST00000362310 71 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 RNA5SP325-201ENST00000363756 130 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
EBF3Q9H4W6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 1240.4 ms