Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC025521.1-201ENST00000621624 286 ntBASIC-0.43□□□□□ -2.48
CDC42EP4Q9H3Q1 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
CDC42EP4Q9H3Q1 RNY3P2-201ENST00000362918 102 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 AC244090.1-201ENST00000441884 93 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-794P-201ENST00000517261 64 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 MIR3613-201ENST00000579844 87 ntBASIC-0.44□□□□□ -2.48
CDC42EP4Q9H3Q1 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-346P-201ENST00000516288 111 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 AC068339.1-201ENST00000526965 141 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-86P-201ENST00000606534 107 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 AC090425.1-201ENST00000610007 140 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 AL627230.5-201ENST00000619807 58 ntBASIC-0.45□□□□□ -2.48
CDC42EP4Q9H3Q1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.46□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.46□□□□□ -2.48
CDC42EP4Q9H3Q1 MIR3914-2-201ENST00000637339 95 ntBASIC-0.46□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 MIR9-2-201ENST00000384838 87 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 MIR451A-201ENST00000385059 72 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 SNORA49-201ENST00000386157 136 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 RNU6-971P-201ENST00000516920 106 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
CDC42EP4Q9H3Q1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 U3.27-201ENST00000391237 200 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU7-85P-201ENST00000458851 63 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 AL513043.2-201ENST00000573941 143 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR4439-201ENST00000583746 80 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 AC145423.2-201ENST00000610631 239 ntBASIC-0.48□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-54P-201ENST00000365563 107 ntBASIC-0.49□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-80P-201ENST00000384195 107 ntBASIC-0.49□□□□□ -2.49
CDC42EP4Q9H3Q1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CDC42EP4Q9H3Q1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 SNORD33.1-201ENST00000516213 88 ntBASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-65P-201ENST00000516332 98 ntBASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR5009-201ENST00000578736 100 ntBASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR4536-1-201ENST00000583537 88 ntBASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.5□□□□□ -2.49
CDC42EP4Q9H3Q1 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 SNORD45B-201ENST00000364617 72 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-659P-201ENST00000516454 104 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 AP000676.1-201ENST00000533307 52 ntBASIC-0.51□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR409-201ENST00000362237 79 ntBASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR582-201ENST00000365731 98 ntBASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 RNY1P9-201ENST00000532431 109 ntBASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR548AX-201ENST00000580117 73 ntBASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.52□□□□□ -2.49
CDC42EP4Q9H3Q1 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR548A1-201ENST00000385041 97 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR548E-201ENST00000408287 88 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 RNA5SP266-201ENST00000410273 108 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 SNORD42B-201ENST00000458893 67 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 MIR4432-201ENST00000581823 84 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 U6.95-201ENST00000636931 70 ntBASIC-0.53□□□□□ -2.49
CDC42EP4Q9H3Q1 SNORD115-25-201ENST00000362619 82 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-132P-201ENST00000383863 107 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-813P-201ENST00000384691 107 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-644P-201ENST00000391155 98 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-762P-201ENST00000517107 102 ntBASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.54□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORD114-4-201ENST00000363962 75 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORD56B-201ENST00000384713 71 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR548A3-201ENST00000385297 97 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 MT-TQ-201ENST00000387372 72 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-907P-201ENST00000390924 102 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORD2-201ENST00000459163 69 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 AC103810.7-201ENST00000607821 91 ntBASIC-0.55□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 AC114755.3-201ENST00000481111 251 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 FGF7P7-201ENST00000514120 227 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR3064-201ENST00000581130 66 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR4777-201ENST00000583710 86 ntBASIC-0.56□□□□□ -2.5
CDC42EP4Q9H3Q1 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms