Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF39Q9H2S5 MIR302D-201ENST00000362275 68 ntBASIC2.92□□□□□ -1.94
RNF39Q9H2S5 MIR3678-201ENST00000578455 94 ntBASIC2.92□□□□□ -1.94
RNF39Q9H2S5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF39Q9H2S5 RNA5SP432-201ENST00000362480 116 ntBASIC2.91□□□□□ -1.94
RNF39Q9H2S5 RNA5SP68-201ENST00000363885 119 ntBASIC2.91□□□□□ -1.94
RNF39Q9H2S5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
RNF39Q9H2S5 AL512310.8-201ENST00000550183 120 ntBASIC2.91□□□□□ -1.94
RNF39Q9H2S5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF39Q9H2S5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNF39Q9H2S5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF39Q9H2S5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
RNF39Q9H2S5 MIR26A1-201ENST00000362205 77 ntBASIC2.9□□□□□ -1.95
RNF39Q9H2S5 RNA5SP508-201ENST00000411327 119 ntBASIC2.9□□□□□ -1.95
RNF39Q9H2S5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.9□□□□□ -1.95
RNF39Q9H2S5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF39Q9H2S5 Y_RNA.519-201ENST00000384553 102 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 SNORA26.9-201ENST00000391322 122 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 snoU13.9-201ENST00000458927 103 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 RNA5SP148-201ENST00000516527 94 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 MIR6817-201ENST00000615588 66 ntBASIC2.89□□□□□ -1.95
RNF39Q9H2S5 RNA5SP276-201ENST00000362580 94 ntBASIC2.88□□□□□ -1.95
RNF39Q9H2S5 SNORA49-201ENST00000386157 136 ntBASIC2.88□□□□□ -1.95
RNF39Q9H2S5 SNORD89-201ENST00000390981 114 ntBASIC2.88□□□□□ -1.95
RNF39Q9H2S5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
RNF39Q9H2S5 MIR3605-201ENST00000583214 100 ntBASIC2.88□□□□□ -1.95
RNF39Q9H2S5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF39Q9H2S5 RNA5SP227-201ENST00000516184 113 ntBASIC2.87□□□□□ -1.95
RNF39Q9H2S5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF39Q9H2S5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF39Q9H2S5 RNA5SP320-201ENST00000516263 124 ntBASIC2.86□□□□□ -1.95
RNF39Q9H2S5 RN7SKP88-201ENST00000516847 250 ntBASIC2.86□□□□□ -1.95
RNF39Q9H2S5 7SK.8-201ENST00000612110 250 ntBASIC2.86□□□□□ -1.95
RNF39Q9H2S5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
RNF39Q9H2S5 7SK.13-201ENST00000622040 250 ntBASIC2.86□□□□□ -1.95
RNF39Q9H2S5 RNU6-502P-201ENST00000362419 108 ntBASIC2.85□□□□□ -1.95
RNF39Q9H2S5 SNORA50A-202ENST00000629536 136 ntBASIC2.85□□□□□ -1.95
RNF39Q9H2S5 MIR6828-201ENST00000636181 60 ntBASIC2.85□□□□□ -1.95
RNF39Q9H2S5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF39Q9H2S5 AC092185.1-201ENST00000491371 97 ntBASIC2.84□□□□□ -1.95
RNF39Q9H2S5 Y_RNA.698-201ENST00000516798 118 ntBASIC2.84□□□□□ -1.95
RNF39Q9H2S5 AC104408.1-201ENST00000605241 170 ntBASIC2.84□□□□□ -1.95
RNF39Q9H2S5 RNU6-361P-201ENST00000364454 107 ntBASIC2.83□□□□□ -1.96
RNF39Q9H2S5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF39Q9H2S5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF39Q9H2S5 SNORA3A-201ENST00000364113 130 ntBASIC2.82□□□□□ -1.96
RNF39Q9H2S5 SNORD114-29-201ENST00000364819 70 ntBASIC2.82□□□□□ -1.96
RNF39Q9H2S5 RNU6-910P-201ENST00000390844 107 ntBASIC2.82□□□□□ -1.96
RNF39Q9H2S5 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
RNF39Q9H2S5 SNORA27.2-201ENST00000363365 126 ntBASIC2.81□□□□□ -1.96
RNF39Q9H2S5 RNU6-258P-201ENST00000390884 101 ntBASIC2.81□□□□□ -1.96
RNF39Q9H2S5 MIR4781-201ENST00000585250 76 ntBASIC2.81□□□□□ -1.96
RNF39Q9H2S5 Y_RNA.699-201ENST00000516803 93 ntBASIC2.8□□□□□ -1.96
RNF39Q9H2S5 RNU6-176P-201ENST00000517196 105 ntBASIC2.8□□□□□ -1.96
RNF39Q9H2S5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF39Q9H2S5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF39Q9H2S5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF39Q9H2S5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF39Q9H2S5 HMGN2P22-201ENST00000427588 175 ntBASIC2.79□□□□□ -1.96
RNF39Q9H2S5 SNORD79.1-201ENST00000516069 84 ntBASIC2.79□□□□□ -1.96
RNF39Q9H2S5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RNF39Q9H2S5 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
RNF39Q9H2S5 RNA5SP380-201ENST00000517190 98 ntBASIC2.78□□□□□ -1.96
RNF39Q9H2S5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF39Q9H2S5 RNA5SP289-201ENST00000362332 137 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 RNU1-124P-201ENST00000363861 145 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 SNORA70B-201ENST00000384210 135 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 MIR27B-201ENST00000385129 97 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 snoU13.26-201ENST00000459452 105 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 SNORA70.25-201ENST00000612741 95 ntBASIC2.77□□□□□ -1.97
RNF39Q9H2S5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF39Q9H2S5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNF39Q9H2S5 RNA5SP210-201ENST00000391034 120 ntBASIC2.76□□□□□ -1.97
RNF39Q9H2S5 SNORD115.2-201ENST00000391126 59 ntBASIC2.76□□□□□ -1.97
RNF39Q9H2S5 AC008413.1-201ENST00000511864 177 ntBASIC2.76□□□□□ -1.97
RNF39Q9H2S5 MIR4713-201ENST00000582691 75 ntBASIC2.76□□□□□ -1.97
RNF39Q9H2S5 MIR202-201ENST00000362219 110 ntBASIC2.75□□□□□ -1.97
RNF39Q9H2S5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF39Q9H2S5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF39Q9H2S5 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
RNF39Q9H2S5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF39Q9H2S5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RNF39Q9H2S5 MIR221-201ENST00000385135 110 ntBASIC2.73□□□□□ -1.97
RNF39Q9H2S5 SNORD105-201ENST00000386910 85 ntBASIC2.73□□□□□ -1.97
RNF39Q9H2S5 RNU6-1238P-201ENST00000517215 102 ntBASIC2.73□□□□□ -1.97
RNF39Q9H2S5 AC084768.2-201ENST00000622736 221 ntBASIC2.73□□□□□ -1.97
RNF39Q9H2S5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF39Q9H2S5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF39Q9H2S5 Y_RNA.134-201ENST00000363435 105 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 SNORD115-23-201ENST00000364461 82 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 SNORA17.4-201ENST00000391287 132 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 RNU6-237P-201ENST00000515985 71 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.72□□□□□ -1.97
RNF39Q9H2S5 AC079804.2-201ENST00000490376 200 ntBASIC2.71□□□□□ -1.98
RNF39Q9H2S5 SNORD53-201ENST00000579969 78 ntBASIC2.71□□□□□ -1.98
RNF39Q9H2S5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms