Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.5□□□□□ -2.33
MMP28Q9H239 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
MMP28Q9H239 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 MIR451A-201ENST00000385059 72 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 AC022137.1-201ENST00000483735 151 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 MIR4796-201ENST00000580742 81 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 AL162376.1-201ENST00000624117 175 ntBASIC0.49□□□□□ -2.33
MMP28Q9H239 MIR617-201ENST00000385030 97 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
MMP28Q9H239 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 MIR4752-201ENST00000579672 72 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 MIR3140-201ENST00000583685 90 ntBASIC0.48□□□□□ -2.33
MMP28Q9H239 SNORD118-201ENST00000363593 134 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 Y_RNA.388-201ENST00000383919 113 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNY4P29-201ENST00000410801 97 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNU6-1052P-201ENST00000411398 104 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 FGF7P7-201ENST00000514120 227 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNU6-719P-201ENST00000516671 104 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 RNU6-1057P-201ENST00000517162 102 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 MIR5588-201ENST00000581890 63 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 AC006160.2-201ENST00000637708 154 ntBASIC0.47□□□□□ -2.33
MMP28Q9H239 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
MMP28Q9H239 SNORD115-37-201ENST00000363768 82 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 RNU6-1051P-201ENST00000365471 102 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 MIR518A1-201ENST00000385068 85 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 SNORA26.2-201ENST00000390922 122 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 RNU6-592P-201ENST00000411333 103 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 RNA5SP484-201ENST00000458857 111 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 RNU7-74P-201ENST00000459104 62 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 AC093729.1-201ENST00000513074 128 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 SNORA25.13-201ENST00000516395 103 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
MMP28Q9H239 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
MMP28Q9H239 RNU6-979P-201ENST00000383896 107 ntBASIC0.45□□□□□ -2.34
MMP28Q9H239 RNU6-820P-201ENST00000384273 107 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 AC093423.1-201ENST00000440817 142 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 NAMPTP3-201ENST00000569273 224 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 RNU1-29P-201ENST00000606574 126 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 SNORA70.25-201ENST00000612741 95 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.44□□□□□ -2.34
MMP28Q9H239 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
MMP28Q9H239 RNU1-141P-201ENST00000364623 158 ntBASIC0.43□□□□□ -2.34
MMP28Q9H239 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
MMP28Q9H239 AC140658.3-201ENST00000567603 271 ntBASIC0.43□□□□□ -2.34
MMP28Q9H239 SNORA63.2-201ENST00000362603 126 ntBASIC0.42□□□□□ -2.34
MMP28Q9H239 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
MMP28Q9H239 snoU13.17-201ENST00000458802 104 ntBASIC0.42□□□□□ -2.34
MMP28Q9H239 Y_RNA.30-201ENST00000362572 97 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 RNA5SP173-201ENST00000364857 136 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 RNU6-1276P-201ENST00000365372 104 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 RNU6-573P-201ENST00000383938 106 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 Y_RNA.423-201ENST00000384057 113 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 Y_RNA.426-201ENST00000384068 113 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 SNORA24B-201ENST00000384176 131 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 RNU6-1152P-201ENST00000384576 107 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 MIR1302-4-201ENST00000408701 150 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 RNU2-59P-201ENST00000410482 191 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 MIR4460-201ENST00000577862 86 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 MIR924-201ENST00000638017 53 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 AC073869.9-201ENST00000641610 120 ntBASIC0.41□□□□□ -2.34
MMP28Q9H239 Y_RNA.115-201ENST00000363272 98 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 RNU6-242P-201ENST00000384359 107 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 Y_RNA.607-201ENST00000410597 98 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 AC006210.1-201ENST00000424882 111 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 AL450471.1-201ENST00000447509 127 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 RNU7-171P-201ENST00000459581 62 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 RNU6-1108P-201ENST00000516308 104 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 RNA5SP330-201ENST00000517096 96 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 MIR548O2-201ENST00000616090 70 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
MMP28Q9H239 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNU5F-1-201ENST00000362507 117 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNY4P3-201ENST00000365254 95 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 Y_RNA.374-201ENST00000365606 101 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNU6V-201ENST00000384105 107 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 MT-TY-201ENST00000387409 66 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 U3.27-201ENST00000391237 200 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNU5B-6P-201ENST00000516765 68 ntBASIC0.39□□□□□ -2.35
MMP28Q9H239 RNU6-161P-201ENST00000363051 106 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 RNU6-624P-201ENST00000363411 107 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 RNU6-54P-201ENST00000365563 107 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 SNORD110-201ENST00000408189 75 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 YWHAEP2-201ENST00000580066 112 ntBASIC0.38□□□□□ -2.35
MMP28Q9H239 MIR4473-201ENST00000583731 91 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms