Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RNU6-520P-201ENST00000384717 104 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 MIR520F-201ENST00000384824 87 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 SNORD13-201ENST00000459299 104 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 SNORA25.15-201ENST00000516487 89 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
NBPF3Q9H094 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NBPF3Q9H094 RNU6-698P-201ENST00000363523 107 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 RNU6-34P-201ENST00000364874 107 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 MIR521-2-201ENST00000384818 87 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 MIR517B-201ENST00000385102 67 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 MT-TY-201ENST00000387409 66 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 AP1B1P2-201ENST00000416196 106 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 RNU7-174P-201ENST00000516248 59 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 uc_338.10-201ENST00000621872 182 ntBASIC2.22□□□□□ -2.05
NBPF3Q9H094 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.21□□□□□ -2.06
NBPF3Q9H094 MIR4460-201ENST00000577862 86 ntBASIC2.21□□□□□ -2.06
NBPF3Q9H094 U2.7-201ENST00000619197 100 ntBASIC2.21□□□□□ -2.06
NBPF3Q9H094 RNU7-21P-201ENST00000459430 62 ntBASIC2.2□□□□□ -2.06
NBPF3Q9H094 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.2□□□□□ -2.06
NBPF3Q9H094 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.2□□□□□ -2.06
NBPF3Q9H094 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NBPF3Q9H094 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
NBPF3Q9H094 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NBPF3Q9H094 Y_RNA.250-201ENST00000364542 110 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 MIR644A-201ENST00000385262 94 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NBPF3Q9H094 RNU4-62P-201ENST00000410125 130 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 AL591704.2-201ENST00000421658 181 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 RNU7-74P-201ENST00000459104 62 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 snoU13.18-201ENST00000459483 104 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 RN7SKP88-201ENST00000516847 250 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 7SK.8-201ENST00000612110 250 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 7SK.11-201ENST00000615477 250 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 7SK.13-201ENST00000622040 250 ntBASIC2.19□□□□□ -2.06
NBPF3Q9H094 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NBPF3Q9H094 RNU6-35P-201ENST00000384530 107 ntBASIC2.18□□□□□ -2.06
NBPF3Q9H094 RNU6-980P-201ENST00000516925 103 ntBASIC2.18□□□□□ -2.06
NBPF3Q9H094 MIR1-1-201ENST00000362147 71 ntBASIC2.17□□□□□ -2.06
NBPF3Q9H094 AC021146.9-201ENST00000512503 156 ntBASIC2.17□□□□□ -2.06
NBPF3Q9H094 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
NBPF3Q9H094 SNORD33-201ENST00000362761 85 ntBASIC2.16□□□□□ -2.06
NBPF3Q9H094 RNU5B-6P-201ENST00000516765 68 ntBASIC2.16□□□□□ -2.06
NBPF3Q9H094 MIR3122-201ENST00000577243 73 ntBASIC2.16□□□□□ -2.06
NBPF3Q9H094 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.16□□□□□ -2.06
NBPF3Q9H094 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NBPF3Q9H094 SNORA41B-201ENST00000384785 128 ntBASIC2.15□□□□□ -2.07
NBPF3Q9H094 SNORD41.1-201ENST00000391000 69 ntBASIC2.15□□□□□ -2.07
NBPF3Q9H094 SNORA67.5-201ENST00000391036 107 ntBASIC2.15□□□□□ -2.07
NBPF3Q9H094 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.15□□□□□ -2.07
NBPF3Q9H094 SNORA7.1-201ENST00000363750 139 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 SNORA33.1-201ENST00000364957 130 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 MIR30A-201ENST00000385092 71 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 MIR548L-201ENST00000408303 86 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 AC244669.1-204ENST00000621564 178 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 AC084768.2-201ENST00000622736 221 ntBASIC2.14□□□□□ -2.07
NBPF3Q9H094 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
NBPF3Q9H094 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
NBPF3Q9H094 RMST_2.1-201ENST00000617263 136 ntBASIC2.13□□□□□ -2.07
NBPF3Q9H094 RNU1-141P-201ENST00000364623 158 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 SNORD48-201ENST00000364953 64 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 RNU6-910P-201ENST00000390844 107 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 RNU7-90P-201ENST00000459216 62 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 RNU7-119P-201ENST00000459279 63 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.12□□□□□ -2.07
NBPF3Q9H094 SNORD114-4-201ENST00000363962 75 ntBASIC2.11□□□□□ -2.07
NBPF3Q9H094 Y_RNA.224-201ENST00000364308 111 ntBASIC2.11□□□□□ -2.07
NBPF3Q9H094 RNU6-231P-201ENST00000517122 103 ntBASIC2.11□□□□□ -2.07
NBPF3Q9H094 BX248123.2-201ENST00000606318 124 ntBASIC2.11□□□□□ -2.07
NBPF3Q9H094 MIR8081-201ENST00000611533 95 ntBASIC2.11□□□□□ -2.07
NBPF3Q9H094 Y_RNA.125-201ENST00000363371 111 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 SNORA80D-201ENST00000384488 135 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 SNORD28-201ENST00000384706 75 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 RNU6-1246P-201ENST00000391064 107 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 MIR4639-201ENST00000584938 69 ntBASIC2.1□□□□□ -2.07
NBPF3Q9H094 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NBPF3Q9H094 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NBPF3Q9H094 Y_RNA.325-201ENST00000365171 122 ntBASIC2.09□□□□□ -2.07
NBPF3Q9H094 RNU6-716P-201ENST00000365621 103 ntBASIC2.09□□□□□ -2.07
NBPF3Q9H094 MIR1827-201ENST00000408549 66 ntBASIC2.09□□□□□ -2.07
NBPF3Q9H094 AC002350.1-201ENST00000490759 375 ntBASIC2.09□□□□□ -2.07
NBPF3Q9H094 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.09□□□□□ -2.07
NBPF3Q9H094 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
NBPF3Q9H094 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.09□□□□□ -2.07
NBPF3Q9H094 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NBPF3Q9H094 RNU6-930P-201ENST00000390938 100 ntBASIC2.08□□□□□ -2.08
NBPF3Q9H094 SNORD79.1-201ENST00000516069 84 ntBASIC2.08□□□□□ -2.08
NBPF3Q9H094 SNORA9.1-201ENST00000362412 131 ntBASIC2.07□□□□□ -2.08
NBPF3Q9H094 RNU6-726P-201ENST00000364680 107 ntBASIC2.07□□□□□ -2.08
NBPF3Q9H094 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.07□□□□□ -2.08
NBPF3Q9H094 Y_RNA.633-201ENST00000459107 95 ntBASIC2.07□□□□□ -2.08
NBPF3Q9H094 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
NBPF3Q9H094 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NBPF3Q9H094 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NBPF3Q9H094 RNU4-33P-201ENST00000364316 85 ntBASIC2.06□□□□□ -2.08
NBPF3Q9H094 Y_RNA.246-201ENST00000364495 108 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms