Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.94□□□□□ -2.72
UPF3BQ9BZI7 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.94□□□□□ -2.72
UPF3BQ9BZI7 RNU7-88P-201ENST00000458752 63 ntBASIC-1.94□□□□□ -2.72
UPF3BQ9BZI7 RNU6-719P-201ENST00000516671 104 ntBASIC-1.94□□□□□ -2.72
UPF3BQ9BZI7 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.94□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 RNU6-980P-201ENST00000516925 103 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 MIR5683-201ENST00000636514 76 ntBASIC-1.95□□□□□ -2.72
UPF3BQ9BZI7 RNU6-774P-201ENST00000363238 107 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 SNORD38.1-201ENST00000363863 68 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 RNU6-768P-201ENST00000384683 107 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 MIR1255B2-201ENST00000408618 67 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 Z83846.1-201ENST00000446798 265 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 AL137067.1-201ENST00000615933 120 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.96□□□□□ -2.72
UPF3BQ9BZI7 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.97□□□□□ -2.72
UPF3BQ9BZI7 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.97□□□□□ -2.72
UPF3BQ9BZI7 MIR3139-201ENST00000579145 76 ntBASIC-1.97□□□□□ -2.72
UPF3BQ9BZI7 MIR548AG1-201ENST00000579932 66 ntBASIC-1.97□□□□□ -2.72
UPF3BQ9BZI7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.97□□□□□ -2.72
UPF3BQ9BZI7 RNU6-508P-201ENST00000363231 103 ntBASIC-1.98□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.98□□□□□ -2.73
UPF3BQ9BZI7 MIR3149-201ENST00000584629 83 ntBASIC-1.98□□□□□ -2.73
UPF3BQ9BZI7 MIR1255B1-201ENST00000636325 63 ntBASIC-1.98□□□□□ -2.73
UPF3BQ9BZI7 RNU6-79P-201ENST00000362511 107 ntBASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 RNU6-275P-201ENST00000364910 107 ntBASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 RNU6-400P-201ENST00000391173 106 ntBASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 AC018880.2-201ENST00000414265 201 ntBASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 RNU6-75P-201ENST00000515944 104 ntBASIC-1.99□□□□□ -2.73
UPF3BQ9BZI7 SNORD116-4-201ENST00000384733 96 ntBASIC-2□□□□□ -2.73
UPF3BQ9BZI7 MT-TI-201ENST00000387365 69 ntBASIC-2□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.603-201ENST00000410571 108 ntBASIC-2□□□□□ -2.73
UPF3BQ9BZI7 AL512310.12-203ENST00000640543 90 ntBASIC-2□□□□□ -2.73
UPF3BQ9BZI7 RNU6-495P-201ENST00000362995 107 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 SNORA33.1-201ENST00000364957 130 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 RNU4-88P-201ENST00000411220 86 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 RNY3P16-201ENST00000516338 101 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 MIR3163-201ENST00000581592 73 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 MIR4490-201ENST00000582647 84 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.01□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 RNU6-309P-201ENST00000364573 106 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 SNORA75.5-201ENST00000391291 81 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 SNORA7.5-201ENST00000410672 110 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.02□□□□□ -2.73
UPF3BQ9BZI7 RNA5SP405-201ENST00000363059 114 ntBASIC-2.03□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.03□□□□□ -2.73
UPF3BQ9BZI7 FGF7P7-201ENST00000514120 227 ntBASIC-2.03□□□□□ -2.73
UPF3BQ9BZI7 U7.5-201ENST00000517224 61 ntBASIC-2.03□□□□□ -2.73
UPF3BQ9BZI7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.03□□□□□ -2.73
UPF3BQ9BZI7 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 SNORD18B-201ENST00000365659 72 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 MT-TM-201ENST00000387377 68 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 RNU6-493P-201ENST00000391321 108 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 RNA5SP147-201ENST00000516493 109 ntBASIC-2.04□□□□□ -2.74
UPF3BQ9BZI7 RNU6-194P-201ENST00000363862 105 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 RNU6-563P-201ENST00000364872 108 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 AC113195.1-201ENST00000579952 141 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 MIR3123-201ENST00000583417 75 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 AC021753.1-201ENST00000635724 168 ntBASIC-2.05□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 RNY3P1-201ENST00000365085 102 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 MIR4643-201ENST00000577473 78 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 MIR548AM-201ENST00000584298 74 ntBASIC-2.06□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.07□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.07□□□□□ -2.74
UPF3BQ9BZI7 MTND1P19-201ENST00000511780 315 ntBASIC-2.07□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.07□□□□□ -2.74
UPF3BQ9BZI7 CYP3A54P-201ENST00000566950 75 ntBASIC-2.07□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.08□□□□□ -2.74
UPF3BQ9BZI7 RNU6-246P-201ENST00000384702 107 ntBASIC-2.08□□□□□ -2.74
UPF3BQ9BZI7 U6.106-201ENST00000636360 105 ntBASIC-2.08□□□□□ -2.74
UPF3BQ9BZI7 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 RNU6-363P-201ENST00000362895 105 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 SNORD42.2-201ENST00000365570 69 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 MIR519A2-201ENST00000384990 87 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 MIR548Q-201ENST00000408404 100 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 AC139792.2-201ENST00000624218 587 ntBASIC-2.09□□□□□ -2.74
UPF3BQ9BZI7 MIR369-201ENST00000362155 70 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 SNORA63.2-201ENST00000362603 126 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 812.5 ms