Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 MIR519A1-201ENST00000385257 85 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 MIR1257-201ENST00000408490 117 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 RNU6-380P-201ENST00000410207 107 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 RPS26P5-201ENST00000418544 335 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 MIR548AD-201ENST00000584780 82 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 MIR6082-201ENST00000613604 109 ntBASIC1.23□□□□□ -2.21
SALL3Q9BXA9 Y_RNA.30-201ENST00000362572 97 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 RNU6-895P-201ENST00000384125 103 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 RNU6-1052P-201ENST00000411398 104 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 RNU6-719P-201ENST00000516671 104 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 MIR548H5-201ENST00000580314 60 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 MIR4696-201ENST00000581431 70 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 SNORD92-201ENST00000585078 85 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 AC103810.9-201ENST00000606688 112 ntBASIC1.22□□□□□ -2.21
SALL3Q9BXA9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SALL3Q9BXA9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SALL3Q9BXA9 RNU6-403P-201ENST00000363163 104 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 RNA5SP457-201ENST00000363657 124 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 Y_RNA.375-201ENST00000365625 101 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 RNU6-910P-201ENST00000390844 107 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 SNORD83.1-201ENST00000411362 77 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 TRAJ51-201ENST00000504127 63 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 RNU6-980P-201ENST00000516925 103 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 MTRNR2L2-201ENST00000604882 87 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.21□□□□□ -2.22
SALL3Q9BXA9 Y_RNA.68-201ENST00000362881 102 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 RNU6-382P-201ENST00000365181 106 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 RNU6-243P-201ENST00000391140 107 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 AL691482.2-201ENST00000457453 84 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 MIR3920-201ENST00000581751 86 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
SALL3Q9BXA9 MIR101-2-201ENST00000362195 79 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 SNORA25.5-201ENST00000363782 126 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 SNORD100-201ENST00000408573 76 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 SNORD63B-201ENST00000411005 70 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 RNU7-195P-201ENST00000458793 62 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 AC013244.2-201ENST00000603396 103 ntBASIC1.19□□□□□ -2.22
SALL3Q9BXA9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SALL3Q9BXA9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 RNU6-753P-201ENST00000363926 107 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 RNA5SP117-201ENST00000365294 118 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 MIR548U-201ENST00000390728 81 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 MIR548F3-201ENST00000408509 87 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 SCARNA21.1-201ENST00000515996 128 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 AC069503.3-201ENST00000618674 145 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 TRDV1-202ENST00000621643 102 ntBASIC1.18□□□□□ -2.22
SALL3Q9BXA9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SALL3Q9BXA9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.17□□□□□ -2.22
SALL3Q9BXA9 MIR193B-201ENST00000384907 83 ntBASIC1.17□□□□□ -2.22
SALL3Q9BXA9 MIR938-201ENST00000401216 83 ntBASIC1.17□□□□□ -2.22
SALL3Q9BXA9 AC023827.1-201ENST00000569247 97 ntBASIC1.17□□□□□ -2.22
SALL3Q9BXA9 Y_RNA.433-201ENST00000384089 102 ntBASIC1.16□□□□□ -2.22
SALL3Q9BXA9 RNU6-808P-201ENST00000391233 108 ntBASIC1.16□□□□□ -2.22
SALL3Q9BXA9 AC097510.1-201ENST00000510945 133 ntBASIC1.16□□□□□ -2.22
SALL3Q9BXA9 MIR1273G-201ENST00000577677 100 ntBASIC1.16□□□□□ -2.22
SALL3Q9BXA9 MIR8053-201ENST00000613344 75 ntBASIC1.16□□□□□ -2.22
SALL3Q9BXA9 RNU6-664P-201ENST00000362381 107 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 SNORD60.1-201ENST00000362451 73 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 RNU6-466P-201ENST00000391224 103 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 RNU7-56P-201ENST00000458744 62 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 MIR4804-201ENST00000581683 73 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 MIR3938-201ENST00000582157 103 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 AC027335.2-201ENST00000624030 375 ntBASIC1.15□□□□□ -2.22
SALL3Q9BXA9 MIR1-1-201ENST00000362147 71 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RNA5SP245-201ENST00000364239 121 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RNU6-364P-201ENST00000384387 107 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 MIR203A-201ENST00000384836 110 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RNU6-122P-201ENST00000516818 107 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 AC138907.6-201ENST00000568401 126 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 AC138869.1-201ENST00000568623 124 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 NAMPTP3-201ENST00000569273 224 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 MIR548AG2-201ENST00000581228 64 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 MIR4773-1-201ENST00000637203 78 ntBASIC1.15□□□□□ -2.23
SALL3Q9BXA9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.15□□□□□ -2.23
SALL3Q9BXA9 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
SALL3Q9BXA9 MIR451A-201ENST00000385059 72 ntBASIC1.14□□□□□ -2.23
SALL3Q9BXA9 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
SALL3Q9BXA9 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 288 ms