Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-638P-201ENST00000516582 104 ntBASIC0.86□□□□□ -2.27
NDC1Q9BTX1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
NDC1Q9BTX1 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
NDC1Q9BTX1 RNU6-208P-201ENST00000362431 107 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 RNU6-315P-201ENST00000362666 107 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 RNU6-726P-201ENST00000364680 107 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 MIR617-201ENST00000385030 97 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 SNORD41.1-201ENST00000391000 69 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
NDC1Q9BTX1 Y_RNA.660-201ENST00000516002 120 ntBASIC0.85□□□□□ -2.27
NDC1Q9BTX1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NDC1Q9BTX1 MIRLET7A1-201ENST00000362295 80 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 RNU5F-1-201ENST00000362507 117 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 SNORA36.1-201ENST00000363424 132 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 RNU6-686P-201ENST00000364839 107 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 MIR519E-201ENST00000385075 84 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
NDC1Q9BTX1 SNORA24B-201ENST00000384176 131 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 RNU6-24P-201ENST00000384440 107 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 U3.27-201ENST00000391237 200 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 RNA5SP94-201ENST00000516917 108 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.83□□□□□ -2.28
NDC1Q9BTX1 MIR6828-201ENST00000636181 60 ntBASIC0.83□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.244-201ENST00000364484 109 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.264-201ENST00000364665 102 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 RNY1P8-201ENST00000383970 114 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 SNORA36.2-201ENST00000384004 127 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.82□□□□□ -2.28
NDC1Q9BTX1 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.82□□□□□ -2.28
NDC1Q9BTX1 SNORD114-26-201ENST00000363543 72 ntBASIC0.81□□□□□ -2.28
NDC1Q9BTX1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
NDC1Q9BTX1 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
NDC1Q9BTX1 RNU7-74P-201ENST00000459104 62 ntBASIC0.81□□□□□ -2.28
NDC1Q9BTX1 RNU6-1094P-201ENST00000362416 104 ntBASIC0.8□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.8□□□□□ -2.28
NDC1Q9BTX1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
NDC1Q9BTX1 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
NDC1Q9BTX1 RNA5SP227-201ENST00000516184 113 ntBASIC0.8□□□□□ -2.28
NDC1Q9BTX1 RNA5SP268-201ENST00000516828 124 ntBASIC0.8□□□□□ -2.28
NDC1Q9BTX1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
NDC1Q9BTX1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.12-201ENST00000362393 112 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
NDC1Q9BTX1 RNU6-269P-201ENST00000391077 97 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 YWHAEP2-201ENST00000580066 112 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 YWHAEP3-201ENST00000582767 121 ntBASIC0.79□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.371-201ENST00000365591 113 ntBASIC0.78□□□□□ -2.28
NDC1Q9BTX1 MIR216B-201ENST00000390186 82 ntBASIC0.78□□□□□ -2.28
NDC1Q9BTX1 RNU6-380P-201ENST00000410207 107 ntBASIC0.78□□□□□ -2.28
NDC1Q9BTX1 AC097510.1-201ENST00000510945 133 ntBASIC0.78□□□□□ -2.28
NDC1Q9BTX1 Y_RNA.532-201ENST00000384590 113 ntBASIC0.77□□□□□ -2.29
NDC1Q9BTX1 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
NDC1Q9BTX1 AC093423.1-201ENST00000440817 142 ntBASIC0.77□□□□□ -2.29
NDC1Q9BTX1 MIR7107-201ENST00000611489 80 ntBASIC0.77□□□□□ -2.29
NDC1Q9BTX1 AL162376.1-201ENST00000624117 175 ntBASIC0.77□□□□□ -2.29
NDC1Q9BTX1 RNU6-824P-201ENST00000363724 104 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 RNU6-1177P-201ENST00000391058 104 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 RNU2-59P-201ENST00000410482 191 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 MIR548O2-201ENST00000616090 70 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 MIR6779-201ENST00000617283 64 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
NDC1Q9BTX1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NDC1Q9BTX1 RNU6-340P-201ENST00000364005 107 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 RNU1-141P-201ENST00000364623 158 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 SNORA8.2-201ENST00000384372 139 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 RNU6-303P-201ENST00000517091 106 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
NDC1Q9BTX1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.74□□□□□ -2.29
NDC1Q9BTX1 RNA5SP517-201ENST00000364724 117 ntBASIC0.74□□□□□ -2.29
NDC1Q9BTX1 RNA5SP484-201ENST00000458857 111 ntBASIC0.74□□□□□ -2.29
NDC1Q9BTX1 MIR4460-201ENST00000577862 86 ntBASIC0.74□□□□□ -2.29
NDC1Q9BTX1 MIR4484-201ENST00000582855 83 ntBASIC0.74□□□□□ -2.29
NDC1Q9BTX1 RNU6V-201ENST00000384105 107 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 MT-TY-201ENST00000387409 66 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 Y_RNA.606-201ENST00000410579 103 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 U6.81-201ENST00000612550 106 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 AC092634.7-201ENST00000621022 103 ntBASIC0.73□□□□□ -2.29
NDC1Q9BTX1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
NDC1Q9BTX1 RNU6-54P-201ENST00000365563 107 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 AC074348.1-201ENST00000426503 132 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 SCARNA18B-201ENST00000458806 135 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 RNU6-807P-201ENST00000516805 107 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 SNORA25.18-201ENST00000607153 114 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 AC145423.2-201ENST00000610631 239 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 MIR1297-201ENST00000637311 77 ntBASIC0.72□□□□□ -2.29
NDC1Q9BTX1 RNU6-681P-201ENST00000364012 104 ntBASIC0.71□□□□□ -2.3
NDC1Q9BTX1 RNU6-382P-201ENST00000365181 106 ntBASIC0.71□□□□□ -2.3
NDC1Q9BTX1 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
NDC1Q9BTX1 MIR889-201ENST00000401280 79 ntBASIC0.71□□□□□ -2.3
NDC1Q9BTX1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 320 ms