Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Y_RNA.264-201ENST00000364665 102 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 RNU6-1051P-201ENST00000365471 102 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.532-201ENST00000384590 113 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.596-201ENST00000410462 109 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 AC073261.1-201ENST00000429409 121 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 AC244505.6-201ENST00000452829 130 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 SCARNA18B-201ENST00000458806 135 ntBASIC1.09□□□□□ -2.23
LRFN3Q9BTN0 MIR520F-201ENST00000384824 87 ntBASIC1.08□□□□□ -2.24
LRFN3Q9BTN0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
LRFN3Q9BTN0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 Y_RNA.545-201ENST00000384652 105 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 MIR4484-201ENST00000582855 83 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 MIR3140-201ENST00000583685 90 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 uc_338.16-201ENST00000621804 95 ntBASIC1.07□□□□□ -2.24
LRFN3Q9BTN0 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
LRFN3Q9BTN0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.06□□□□□ -2.24
LRFN3Q9BTN0 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
LRFN3Q9BTN0 MIR3134-201ENST00000579433 74 ntBASIC1.06□□□□□ -2.24
LRFN3Q9BTN0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 RNU5F-1-201ENST00000362507 117 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 SNORD105-201ENST00000386910 85 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 RNU6-935P-201ENST00000410371 100 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 RNU6-523P-201ENST00000516304 54 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 RNU6-303P-201ENST00000517091 106 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 YWHAEP2-201ENST00000580066 112 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 YWHAEP3-201ENST00000582767 121 ntBASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LRFN3Q9BTN0 RNY4P3-201ENST00000365254 95 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 MIR451A-201ENST00000385059 72 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 AC074348.1-201ENST00000426503 132 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 AC139453.2-201ENST00000487255 133 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 RNU6-807P-201ENST00000516805 107 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 AC068338.1-201ENST00000565567 176 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 MIR1297-201ENST00000637311 77 ntBASIC1.04□□□□□ -2.24
LRFN3Q9BTN0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 RNU6-287P-201ENST00000516230 98 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 RNU6-719P-201ENST00000516671 104 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 MIR2909-201ENST00000617113 69 ntBASIC1.03□□□□□ -2.24
LRFN3Q9BTN0 SNORD115-24-201ENST00000363528 82 ntBASIC1.02□□□□□ -2.25
LRFN3Q9BTN0 RNA5SP403-201ENST00000363598 108 ntBASIC1.02□□□□□ -2.25
LRFN3Q9BTN0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LRFN3Q9BTN0 RNU7-161P-201ENST00000517289 62 ntBASIC1.02□□□□□ -2.25
LRFN3Q9BTN0 SNORD115-44-201ENST00000365391 82 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 SNORA24B-201ENST00000384176 131 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 RNA5SP193-201ENST00000410353 107 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 AC002350.1-201ENST00000490759 375 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 RNU7-13P-201ENST00000516413 62 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.01□□□□□ -2.25
LRFN3Q9BTN0 RNU6-340P-201ENST00000364005 107 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNU6-411P-201ENST00000384451 107 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNU6-70P-201ENST00000516438 60 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNA5SP285-201ENST00000516619 119 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNU6-1057P-201ENST00000517162 102 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 MIR664A-201ENST00000626086 82 ntBASIC1□□□□□ -2.25
LRFN3Q9BTN0 RNU6-330P-201ENST00000363015 107 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 Y_RNA.606-201ENST00000410579 103 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 MIR2113-201ENST00000459007 91 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 AC097510.1-201ENST00000510945 133 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 MIR548AG2-201ENST00000581228 64 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
LRFN3Q9BTN0 RNA5SP117-201ENST00000365294 118 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 RNU6-154P-201ENST00000384306 106 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 MIR644A-201ENST00000385262 94 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 MIR1265-201ENST00000408444 86 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 RNU2-59P-201ENST00000410482 191 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 RNU6-1015P-201ENST00000517121 99 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
LRFN3Q9BTN0 RNU6-824P-201ENST00000363724 104 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 U3.27-201ENST00000391237 200 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 RNU6-687P-201ENST00000516443 89 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 MIR4711-201ENST00000578274 70 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 U6.81-201ENST00000612550 106 ntBASIC0.97□□□□□ -2.25
LRFN3Q9BTN0 RNU6-681P-201ENST00000364012 104 ntBASIC0.96□□□□□ -2.26
LRFN3Q9BTN0 RNU4-45P-201ENST00000365469 141 ntBASIC0.96□□□□□ -2.26
LRFN3Q9BTN0 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
LRFN3Q9BTN0 SNORD99-201ENST00000408612 74 ntBASIC0.96□□□□□ -2.26
LRFN3Q9BTN0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
LRFN3Q9BTN0 SNORA8.1-201ENST00000384250 140 ntBASIC0.95□□□□□ -2.26
LRFN3Q9BTN0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.95□□□□□ -2.26
LRFN3Q9BTN0 AC114801.3-201ENST00000510231 177 ntBASIC0.95□□□□□ -2.26
LRFN3Q9BTN0 AC067863.3-201ENST00000624172 122 ntBASIC0.95□□□□□ -2.26
LRFN3Q9BTN0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 RNU6-587P-201ENST00000391282 106 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms