Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-471P-201ENST00000383944 106 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR519E-201ENST00000385075 84 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR1827-201ENST00000408549 66 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 AL691482.2-201ENST00000457453 84 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORD42B-201ENST00000458893 67 ntBASIC1.2□□□□□ -2.22
CDK5RAP1Q96SZ6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
CDK5RAP1Q96SZ6 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-1216P-201ENST00000362590 107 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-495P-201ENST00000362995 107 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORD115-44-201ENST00000365391 82 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6V-201ENST00000384105 107 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORD75.2-201ENST00000408784 58 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 AC002350.1-201ENST00000490759 375 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR8053-201ENST00000613344 75 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 MIR6509-201ENST00000614603 85 ntBASIC1.17□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-990P-201ENST00000364385 104 ntBASIC1.16□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU6-1039P-201ENST00000383931 107 ntBASIC1.16□□□□□ -2.22
CDK5RAP1Q96SZ6 U3.27-201ENST00000391237 200 ntBASIC1.16□□□□□ -2.22
CDK5RAP1Q96SZ6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORA40.17-201ENST00000517256 115 ntBASIC1.16□□□□□ -2.22
CDK5RAP1Q96SZ6 SNORA25.4-201ENST00000363666 124 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR617-201ENST00000385030 97 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 RNA5SP147-201ENST00000516493 109 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR548O2-201ENST00000616090 70 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU6-716P-201ENST00000365621 103 ntBASIC1.14□□□□□ -2.23
CDK5RAP1Q96SZ6 SNORD124-201ENST00000459577 104 ntBASIC1.14□□□□□ -2.23
CDK5RAP1Q96SZ6 AC067863.3-201ENST00000624172 122 ntBASIC1.14□□□□□ -2.23
CDK5RAP1Q96SZ6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
CDK5RAP1Q96SZ6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.13□□□□□ -2.23
CDK5RAP1Q96SZ6 AC067940.1-201ENST00000458411 300 ntBASIC1.13□□□□□ -2.23
CDK5RAP1Q96SZ6 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
CDK5RAP1Q96SZ6 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
CDK5RAP1Q96SZ6 AC093423.1-201ENST00000440817 142 ntBASIC1.12□□□□□ -2.23
CDK5RAP1Q96SZ6 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR3657-201ENST00000584818 117 ntBASIC1.12□□□□□ -2.23
CDK5RAP1Q96SZ6 RNA5SP117-201ENST00000365294 118 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU6-752P-201ENST00000516376 102 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU5B-6P-201ENST00000516765 68 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
CDK5RAP1Q96SZ6 SNORD18A-201ENST00000363753 72 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR633-201ENST00000384821 98 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 SNORD105-201ENST00000386910 85 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 MTND4LP19-201ENST00000403051 166 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 snoU13.13-201ENST00000458842 104 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU7-24P-201ENST00000458867 62 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR4511-201ENST00000582784 87 ntBASIC1.1□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR499A-201ENST00000384903 122 ntBASIC1.09□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR548L-201ENST00000408303 86 ntBASIC1.09□□□□□ -2.23
CDK5RAP1Q96SZ6 AC018659.1-201ENST00000551083 169 ntBASIC1.09□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
CDK5RAP1Q96SZ6 MIR6504-201ENST00000613520 61 ntBASIC1.09□□□□□ -2.23
CDK5RAP1Q96SZ6 RNU6-645P-201ENST00000364649 106 ntBASIC1.08□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-726P-201ENST00000364680 107 ntBASIC1.08□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-269P-201ENST00000391077 97 ntBASIC1.08□□□□□ -2.24
CDK5RAP1Q96SZ6 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-260P-201ENST00000384092 107 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 SNORD41.1-201ENST00000391000 69 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 SNORD12-201ENST00000391002 90 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 RNA5SP484-201ENST00000458857 111 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 RNA5SP47-201ENST00000517230 109 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 MIR4639-201ENST00000584938 69 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CDK5RAP1Q96SZ6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-668P-201ENST00000364180 107 ntBASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 MT-TY-201ENST00000387409 66 ntBASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 AC110620.1-201ENST00000416042 228 ntBASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 MIR4460-201ENST00000577862 86 ntBASIC1.06□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-469P-201ENST00000516253 101 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-656P-201ENST00000516785 107 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 AC073869.9-201ENST00000641610 120 ntBASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU1-141P-201ENST00000364623 158 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 RNU6-499P-201ENST00000365615 107 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 MIR573-201ENST00000384964 99 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 AC092634.7-201ENST00000621022 103 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 AC103706.3-201ENST00000636297 85 ntBASIC1.04□□□□□ -2.24
CDK5RAP1Q96SZ6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDK5RAP1Q96SZ6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.03□□□□□ -2.24
CDK5RAP1Q96SZ6 RNA5SP247-201ENST00000411181 105 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms