Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 AL136317.1-201ENST00000612653 226 ntBASIC1.79□□□□□ -2.12
TRERF1Q96PN7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRERF1Q96PN7 RNU6-260P-201ENST00000384092 107 ntBASIC1.78□□□□□ -2.12
TRERF1Q96PN7 SNORA67.6-201ENST00000391093 99 ntBASIC1.78□□□□□ -2.12
TRERF1Q96PN7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.78□□□□□ -2.12
TRERF1Q96PN7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TRERF1Q96PN7 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 MIR216B-201ENST00000390186 82 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 RNU6-808P-201ENST00000391233 108 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 RNU6-656P-201ENST00000516785 107 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
TRERF1Q96PN7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 SNORA80D-201ENST00000384488 135 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 MIR644A-201ENST00000385262 94 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 RNU6-321P-201ENST00000410912 106 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 SNORD79.1-201ENST00000516069 84 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 MIR4781-201ENST00000585250 76 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 AL359821.1-201ENST00000605519 182 ntBASIC1.76□□□□□ -2.13
TRERF1Q96PN7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.76□□□□□ -2.13
TRERF1Q96PN7 MIR1-1-201ENST00000362147 71 ntBASIC1.75□□□□□ -2.13
TRERF1Q96PN7 RNU7-90P-201ENST00000459216 62 ntBASIC1.75□□□□□ -2.13
TRERF1Q96PN7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.75□□□□□ -2.13
TRERF1Q96PN7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.75□□□□□ -2.13
TRERF1Q96PN7 AC067863.3-201ENST00000624172 122 ntBASIC1.75□□□□□ -2.13
TRERF1Q96PN7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 SNORA75.1-201ENST00000391130 148 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 RMST_2.1-201ENST00000617263 136 ntBASIC1.74□□□□□ -2.13
TRERF1Q96PN7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRERF1Q96PN7 MIR7-2-201ENST00000384970 110 ntBASIC1.73□□□□□ -2.13
TRERF1Q96PN7 TRMT112P2-201ENST00000512910 132 ntBASIC1.73□□□□□ -2.13
TRERF1Q96PN7 SNORA31.24-201ENST00000517232 57 ntBASIC1.73□□□□□ -2.13
TRERF1Q96PN7 SNORA2.1-201ENST00000363089 137 ntBASIC1.72□□□□□ -2.13
TRERF1Q96PN7 RNA5SP117-201ENST00000365294 118 ntBASIC1.72□□□□□ -2.13
TRERF1Q96PN7 MIR1827-201ENST00000408549 66 ntBASIC1.72□□□□□ -2.13
TRERF1Q96PN7 MIR3938-201ENST00000582157 103 ntBASIC1.72□□□□□ -2.13
TRERF1Q96PN7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRERF1Q96PN7 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
TRERF1Q96PN7 MIR548V-201ENST00000584165 80 ntBASIC1.71□□□□□ -2.14
TRERF1Q96PN7 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
TRERF1Q96PN7 RNU6-1089P-201ENST00000516473 104 ntBASIC1.7□□□□□ -2.14
TRERF1Q96PN7 RNU6-122P-201ENST00000516818 107 ntBASIC1.7□□□□□ -2.14
TRERF1Q96PN7 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
TRERF1Q96PN7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRERF1Q96PN7 RNA5SP327-201ENST00000362494 101 ntBASIC1.69□□□□□ -2.14
TRERF1Q96PN7 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
TRERF1Q96PN7 AC002350.1-201ENST00000490759 375 ntBASIC1.69□□□□□ -2.14
TRERF1Q96PN7 AC244669.1-204ENST00000621564 178 ntBASIC1.69□□□□□ -2.14
TRERF1Q96PN7 MIR6739-201ENST00000622461 75 ntBASIC1.69□□□□□ -2.14
TRERF1Q96PN7 MT-TY-201ENST00000387409 66 ntBASIC1.68□□□□□ -2.14
TRERF1Q96PN7 SNORD41.1-201ENST00000391000 69 ntBASIC1.68□□□□□ -2.14
TRERF1Q96PN7 RNA5SP247-201ENST00000411181 105 ntBASIC1.68□□□□□ -2.14
TRERF1Q96PN7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.68□□□□□ -2.14
TRERF1Q96PN7 MIR4421-201ENST00000578133 69 ntBASIC1.68□□□□□ -2.14
TRERF1Q96PN7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.68□□□□□ -2.14
TRERF1Q96PN7 RNA5SP215-201ENST00000363440 122 ntBASIC1.67□□□□□ -2.14
TRERF1Q96PN7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
TRERF1Q96PN7 snoU13.13-201ENST00000458842 104 ntBASIC1.67□□□□□ -2.14
TRERF1Q96PN7 RNU6-92P-201ENST00000605893 104 ntBASIC1.67□□□□□ -2.14
TRERF1Q96PN7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.66□□□□□ -2.14
TRERF1Q96PN7 SNORD28-201ENST00000384706 75 ntBASIC1.66□□□□□ -2.14
TRERF1Q96PN7 MIR222-201ENST00000384992 110 ntBASIC1.66□□□□□ -2.14
TRERF1Q96PN7 AL157398.1-201ENST00000452981 186 ntBASIC1.66□□□□□ -2.14
TRERF1Q96PN7 MIR4460-201ENST00000577862 86 ntBASIC1.66□□□□□ -2.14
TRERF1Q96PN7 SNORD60.1-201ENST00000362451 73 ntBASIC1.65□□□□□ -2.15
TRERF1Q96PN7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.65□□□□□ -2.15
TRERF1Q96PN7 RNU4-88P-201ENST00000411220 86 ntBASIC1.65□□□□□ -2.15
TRERF1Q96PN7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.65□□□□□ -2.15
TRERF1Q96PN7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.65□□□□□ -2.15
TRERF1Q96PN7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRERF1Q96PN7 MIR630-201ENST00000384957 97 ntBASIC1.64□□□□□ -2.15
TRERF1Q96PN7 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
TRERF1Q96PN7 SNORA70.22-201ENST00000517160 124 ntBASIC1.64□□□□□ -2.15
TRERF1Q96PN7 MIR4639-201ENST00000584938 69 ntBASIC1.64□□□□□ -2.15
TRERF1Q96PN7 MIR7974-201ENST00000615835 79 ntBASIC1.64□□□□□ -2.15
TRERF1Q96PN7 RNU6-726P-201ENST00000364680 107 ntBASIC1.63□□□□□ -2.15
TRERF1Q96PN7 MIR548C-201ENST00000384815 97 ntBASIC1.63□□□□□ -2.15
TRERF1Q96PN7 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
TRERF1Q96PN7 AC018659.1-201ENST00000551083 169 ntBASIC1.63□□□□□ -2.15
TRERF1Q96PN7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRERF1Q96PN7 RNU1-141P-201ENST00000364623 158 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 RNU6-716P-201ENST00000365621 103 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 MIR548L-201ENST00000408303 86 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 RNU7-74P-201ENST00000459104 62 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 RNA5SP61-201ENST00000516453 100 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
TRERF1Q96PN7 SNORD18A-201ENST00000363753 72 ntBASIC1.61□□□□□ -2.15
TRERF1Q96PN7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.61□□□□□ -2.15
TRERF1Q96PN7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRERF1Q96PN7 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
TRERF1Q96PN7 SNORD89-201ENST00000390981 114 ntBASIC1.6□□□□□ -2.15
TRERF1Q96PN7 RNU6-269P-201ENST00000391077 97 ntBASIC1.6□□□□□ -2.15
TRERF1Q96PN7 MIR548AD-201ENST00000584780 82 ntBASIC1.6□□□□□ -2.15
TRERF1Q96PN7 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
TRERF1Q96PN7 RNU6-302P-201ENST00000365249 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms