Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
ZSWIM3Q96MP5 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
ZSWIM3Q96MP5 U6.81-201ENST00000612550 106 ntBASIC1.07□□□□□ -2.24
ZSWIM3Q96MP5 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.07□□□□□ -2.24
ZSWIM3Q96MP5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ZSWIM3Q96MP5 Y_RNA.12-201ENST00000362393 112 ntBASIC1.06□□□□□ -2.24
ZSWIM3Q96MP5 RNU6-523P-201ENST00000516304 54 ntBASIC1.06□□□□□ -2.24
ZSWIM3Q96MP5 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
ZSWIM3Q96MP5 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 MIR519E-201ENST00000385075 84 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 MIR889-201ENST00000401280 79 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 AC097510.1-201ENST00000510945 133 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 RNU6-1057P-201ENST00000517162 102 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 MIR3678-201ENST00000578455 94 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 AC067863.3-201ENST00000624172 122 ntBASIC1.05□□□□□ -2.24
ZSWIM3Q96MP5 RNU6-340P-201ENST00000364005 107 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 MIR216B-201ENST00000390186 82 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 MIR6828-201ENST00000636181 60 ntBASIC1.04□□□□□ -2.24
ZSWIM3Q96MP5 Y_RNA.36-201ENST00000362602 112 ntBASIC1.03□□□□□ -2.24
ZSWIM3Q96MP5 RNU6-824P-201ENST00000363724 104 ntBASIC1.03□□□□□ -2.24
ZSWIM3Q96MP5 RNU6-726P-201ENST00000364680 107 ntBASIC1.03□□□□□ -2.24
ZSWIM3Q96MP5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.03□□□□□ -2.24
ZSWIM3Q96MP5 MIR3134-201ENST00000579433 74 ntBASIC1.03□□□□□ -2.24
ZSWIM3Q96MP5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
ZSWIM3Q96MP5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 RNU4-45P-201ENST00000365469 141 ntBASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 Y_RNA.545-201ENST00000384652 105 ntBASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-1177P-201ENST00000391058 104 ntBASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 AC093423.1-201ENST00000440817 142 ntBASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
ZSWIM3Q96MP5 MIR18A-201ENST00000362310 71 ntBASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 Y_RNA.258-201ENST00000364613 105 ntBASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 RNU7-74P-201ENST00000459104 62 ntBASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 MIR548O2-201ENST00000616090 70 ntBASIC1.01□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-154P-201ENST00000384306 106 ntBASIC1□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-1052P-201ENST00000411398 104 ntBASIC1□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-719P-201ENST00000516671 104 ntBASIC1□□□□□ -2.25
ZSWIM3Q96MP5 MIR4484-201ENST00000582855 83 ntBASIC1□□□□□ -2.25
ZSWIM3Q96MP5 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
ZSWIM3Q96MP5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1□□□□□ -2.25
ZSWIM3Q96MP5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-681P-201ENST00000364012 104 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 MIR7-2-201ENST00000384970 110 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 RNU7-24P-201ENST00000458867 62 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 RNA5SP480-201ENST00000516840 109 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
ZSWIM3Q96MP5 RNU6-411P-201ENST00000384451 107 ntBASIC0.98□□□□□ -2.25
ZSWIM3Q96MP5 Y_RNA.565-201ENST00000384719 101 ntBASIC0.98□□□□□ -2.25
ZSWIM3Q96MP5 AC011195.1-201ENST00000578177 177 ntBASIC0.98□□□□□ -2.25
ZSWIM3Q96MP5 Y_RNA.371-201ENST00000365591 113 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 SNORD75.2-201ENST00000408784 58 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 AC073261.1-201ENST00000429409 121 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 CYP3A137P-201ENST00000562436 69 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 AL162376.1-201ENST00000624117 175 ntBASIC0.97□□□□□ -2.25
ZSWIM3Q96MP5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 SNORA36.1-201ENST00000363424 132 ntBASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 SNORA8.1-201ENST00000384250 140 ntBASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 Y_RNA.681-201ENST00000516445 113 ntBASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-495P-201ENST00000362995 107 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-330P-201ENST00000363015 107 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-382P-201ENST00000365181 106 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-752P-201ENST00000516376 102 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-687P-201ENST00000516443 89 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-1015P-201ENST00000517121 99 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.95□□□□□ -2.26
ZSWIM3Q96MP5 SNORA8.2-201ENST00000384372 139 ntBASIC0.94□□□□□ -2.26
ZSWIM3Q96MP5 MT-TY-201ENST00000387409 66 ntBASIC0.94□□□□□ -2.26
ZSWIM3Q96MP5 RNA5SP94-201ENST00000516917 108 ntBASIC0.94□□□□□ -2.26
ZSWIM3Q96MP5 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.94□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-269P-201ENST00000391077 97 ntBASIC0.93□□□□□ -2.26
ZSWIM3Q96MP5 MIR548L-201ENST00000408303 86 ntBASIC0.93□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-274P-201ENST00000459566 107 ntBASIC0.93□□□□□ -2.26
ZSWIM3Q96MP5 SNORD114-26-201ENST00000363543 72 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-587P-201ENST00000391282 106 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-634P-201ENST00000459134 106 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-70P-201ENST00000516438 60 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 MIR664A-201ENST00000626086 82 ntBASIC0.92□□□□□ -2.26
ZSWIM3Q96MP5 RNU1-141P-201ENST00000364623 158 ntBASIC0.91□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-54P-201ENST00000365563 107 ntBASIC0.91□□□□□ -2.26
ZSWIM3Q96MP5 MIR3675-201ENST00000583661 73 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms