Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.47□□□□□ -2.48
RPUSD4Q96CM3 RNU6-659P-201ENST00000516454 104 ntBASIC-0.47□□□□□ -2.48
RPUSD4Q96CM3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.47□□□□□ -2.48
RPUSD4Q96CM3 RNU6-971P-201ENST00000516920 106 ntBASIC-0.47□□□□□ -2.48
RPUSD4Q96CM3 SNORD114-31-201ENST00000363219 75 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 MIR451A-201ENST00000385059 72 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 RNU6-346P-201ENST00000516288 111 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 MIR3613-201ENST00000579844 87 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 MIR5704-201ENST00000584029 77 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 MIR8068-201ENST00000618032 68 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 uc_338.36-201ENST00000622331 158 ntBASIC-0.48□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 SNORD114-4-201ENST00000363962 75 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 RNU6-644P-201ENST00000391155 98 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 SNORA3B-201ENST00000391305 131 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 RNU7-85P-201ENST00000458851 63 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 RNU6-65P-201ENST00000516332 98 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 AP000676.1-201ENST00000533307 52 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 AL513043.2-201ENST00000573941 143 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 MIR4536-1-201ENST00000583537 88 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 MIR6779-201ENST00000617283 64 ntBASIC-0.49□□□□□ -2.49
RPUSD4Q96CM3 MIR548I1-201ENST00000408810 149 ntBASIC-0.5□□□□□ -2.49
RPUSD4Q96CM3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.5□□□□□ -2.49
RPUSD4Q96CM3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.5□□□□□ -2.49
RPUSD4Q96CM3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.5□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 RNU6-813P-201ENST00000384691 107 ntBASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 SNORD33.1-201ENST00000516213 88 ntBASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 MIR7111-201ENST00000619751 72 ntBASIC-0.51□□□□□ -2.49
RPUSD4Q96CM3 RNA5SP257-201ENST00000363023 116 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 RNU6-476P-201ENST00000384726 107 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 RNU6-762P-201ENST00000517107 102 ntBASIC-0.52□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 RNU6-54P-201ENST00000365563 107 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 MIR548A3-201ENST00000385297 97 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 MIR3681-201ENST00000580089 72 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 MIR4645-201ENST00000583158 77 ntBASIC-0.53□□□□□ -2.49
RPUSD4Q96CM3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORD116-14-201ENST00000383894 92 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORD116-17-201ENST00000383929 92 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORD116-15-201ENST00000384445 92 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORD116-19-201ENST00000384729 92 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 MIR548U-201ENST00000390728 81 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORD42B-201ENST00000458893 67 ntBASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.54□□□□□ -2.5
RPUSD4Q96CM3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 RNU4-36P-201ENST00000364294 144 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 RNU6-905P-201ENST00000384434 107 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 MIR548A1-201ENST00000385041 97 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 RNU6-907P-201ENST00000390924 102 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 MIR548E-201ENST00000408287 88 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 AL500527.2-201ENST00000454105 95 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 MIR4777-201ENST00000583710 86 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 MIR6851-201ENST00000617060 67 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 AC093726.3-201ENST00000637588 150 ntBASIC-0.55□□□□□ -2.5
RPUSD4Q96CM3 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 RNU6-880P-201ENST00000384526 107 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 SNORD4B-201ENST00000459083 72 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 RNU6-412P-201ENST00000516434 106 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 RNU6-62P-201ENST00000516526 102 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 MIR3671-201ENST00000580455 88 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 MIR3064-201ENST00000581130 66 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 AC103810.7-201ENST00000607821 91 ntBASIC-0.56□□□□□ -2.5
RPUSD4Q96CM3 RNU6-132P-201ENST00000383863 107 ntBASIC-0.57□□□□□ -2.5
RPUSD4Q96CM3 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.57□□□□□ -2.5
RPUSD4Q96CM3 SNORA24B-201ENST00000384176 131 ntBASIC-0.57□□□□□ -2.5
RPUSD4Q96CM3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 RNU6-495P-201ENST00000362995 107 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 RNU6-209P-201ENST00000384118 107 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 RNU7-24P-201ENST00000458867 62 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 AC104996.3-201ENST00000590718 94 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 MIR6759-201ENST00000638110 65 ntBASIC-0.58□□□□□ -2.5
RPUSD4Q96CM3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.59□□□□□ -2.5
RPUSD4Q96CM3 RNU6-704P-201ENST00000364162 103 ntBASIC-0.59□□□□□ -2.5
RPUSD4Q96CM3 RNU6-337P-201ENST00000391243 106 ntBASIC-0.59□□□□□ -2.5
RPUSD4Q96CM3 RNU6-904P-201ENST00000516206 101 ntBASIC-0.59□□□□□ -2.5
RPUSD4Q96CM3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
RPUSD4Q96CM3 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms