Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR216B-201ENST00000390186 82 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 RNU6-109P-201ENST00000516364 107 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 RNU6-184P-201ENST00000516514 107 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 AC069503.3-201ENST00000618674 145 ntBASIC0.16□□□□□ -2.38
CHMP4CQ96CF2 RNU6-519P-201ENST00000410590 108 ntBASIC0.15□□□□□ -2.39
CHMP4CQ96CF2 RNU6-75P-201ENST00000515944 104 ntBASIC0.15□□□□□ -2.39
CHMP4CQ96CF2 MIR548AD-201ENST00000584780 82 ntBASIC0.15□□□□□ -2.39
CHMP4CQ96CF2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.14□□□□□ -2.39
CHMP4CQ96CF2 AC093423.1-201ENST00000440817 142 ntBASIC0.14□□□□□ -2.39
CHMP4CQ96CF2 RNU7-61P-201ENST00000515897 61 ntBASIC0.14□□□□□ -2.39
CHMP4CQ96CF2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
CHMP4CQ96CF2 MIR450A1-201ENST00000362262 91 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 SNORD58A-201ENST00000383875 65 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 MIR548U-201ENST00000390728 81 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 RNU7-85P-201ENST00000458851 63 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 RNU6-919P-201ENST00000516731 104 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 RNU6-782P-201ENST00000516852 104 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 YWHAEP2-201ENST00000580066 112 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 MIR4677-201ENST00000584153 80 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
CHMP4CQ96CF2 SNORD116-10-201ENST00000363791 102 ntBASIC0.12□□□□□ -2.39
CHMP4CQ96CF2 SNORD20-201ENST00000384550 80 ntBASIC0.12□□□□□ -2.39
CHMP4CQ96CF2 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
CHMP4CQ96CF2 HMGN2P22-201ENST00000427588 175 ntBASIC0.12□□□□□ -2.39
CHMP4CQ96CF2 SNORA25.13-201ENST00000516395 103 ntBASIC0.12□□□□□ -2.39
CHMP4CQ96CF2 RNU6-215P-201ENST00000365169 102 ntBASIC0.11□□□□□ -2.39
CHMP4CQ96CF2 Y_RNA.660-201ENST00000516002 120 ntBASIC0.11□□□□□ -2.39
CHMP4CQ96CF2 MIR4473-201ENST00000583731 91 ntBASIC0.11□□□□□ -2.39
CHMP4CQ96CF2 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
CHMP4CQ96CF2 MIRLET7F1-201ENST00000362202 87 ntBASIC0.1□□□□□ -2.39
CHMP4CQ96CF2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.09□□□□□ -2.4
CHMP4CQ96CF2 MIR451A-201ENST00000385059 72 ntBASIC0.09□□□□□ -2.4
CHMP4CQ96CF2 MT-TY-201ENST00000387409 66 ntBASIC0.09□□□□□ -2.4
CHMP4CQ96CF2 SNORD4B-201ENST00000459083 72 ntBASIC0.09□□□□□ -2.4
CHMP4CQ96CF2 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 RNU6-755P-201ENST00000364400 103 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 Y_RNA.677-201ENST00000516401 85 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 AC084368.1-201ENST00000620935 65 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 MIR2052-201ENST00000636055 55 ntBASIC0.08□□□□□ -2.4
CHMP4CQ96CF2 SNORA75.1-201ENST00000391130 148 ntBASIC0.07□□□□□ -2.4
CHMP4CQ96CF2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.07□□□□□ -2.4
CHMP4CQ96CF2 RNU6-158P-201ENST00000517104 100 ntBASIC0.07□□□□□ -2.4
CHMP4CQ96CF2 RNU6-811P-201ENST00000384069 107 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 MIR516B1-201ENST00000385211 90 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 RNU6-162P-201ENST00000516228 103 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 RNU5B-6P-201ENST00000516765 68 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 U7.3-201ENST00000616123 62 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 uc_338.10-201ENST00000621872 182 ntBASIC0.06□□□□□ -2.4
CHMP4CQ96CF2 SNORA63.4-201ENST00000362763 126 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 U3.27-201ENST00000391237 200 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 AL035461.1-201ENST00000421490 332 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
CHMP4CQ96CF2 RNU6-132P-201ENST00000383863 107 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 MTATP8P2-201ENST00000435212 202 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 MIR3064-201ENST00000581130 66 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 AC104996.3-201ENST00000590718 94 ntBASIC0.04□□□□□ -2.4
CHMP4CQ96CF2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.03□□□□□ -2.4
CHMP4CQ96CF2 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.4
CHMP4CQ96CF2 FGF7P7-201ENST00000514120 227 ntBASIC0.03□□□□□ -2.4
CHMP4CQ96CF2 MIR3925-201ENST00000584674 77 ntBASIC0.03□□□□□ -2.4
CHMP4CQ96CF2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.03□□□□□ -2.4
CHMP4CQ96CF2 RNU6V-201ENST00000384105 107 ntBASIC0.02□□□□□ -2.41
CHMP4CQ96CF2 Y_RNA.609-201ENST00000410669 89 ntBASIC0.02□□□□□ -2.41
CHMP4CQ96CF2 RNA5SP395-201ENST00000516567 118 ntBASIC0.02□□□□□ -2.41
CHMP4CQ96CF2 MIR548O2-201ENST00000616090 70 ntBASIC0.02□□□□□ -2.41
CHMP4CQ96CF2 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CHMP4CQ96CF2 Y_RNA.491-201ENST00000384417 107 ntBASIC0.01□□□□□ -2.41
CHMP4CQ96CF2 SNORA40.13-201ENST00000516379 120 ntBASIC0.01□□□□□ -2.41
CHMP4CQ96CF2 RNU6-32P-201ENST00000383948 107 ntBASIC0□□□□□ -2.41
CHMP4CQ96CF2 RNU6-13P-201ENST00000384248 107 ntBASIC0□□□□□ -2.41
CHMP4CQ96CF2 RNU6-12P-201ENST00000384604 107 ntBASIC0□□□□□ -2.41
CHMP4CQ96CF2 RNU6-41P-201ENST00000384741 107 ntBASIC0□□□□□ -2.41
CHMP4CQ96CF2 RNU4-32P-201ENST00000363404 141 ntBASIC-0.01□□□□□ -2.41
CHMP4CQ96CF2 RNA5SP163-201ENST00000410304 99 ntBASIC-0.01□□□□□ -2.41
CHMP4CQ96CF2 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
CHMP4CQ96CF2 AC026421.1-201ENST00000519101 163 ntBASIC-0.01□□□□□ -2.41
CHMP4CQ96CF2 MIR548H2-201ENST00000408874 88 ntBASIC-0.02□□□□□ -2.41
CHMP4CQ96CF2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
CHMP4CQ96CF2 AP001318.4-201ENST00000616637 121 ntBASIC-0.02□□□□□ -2.41
CHMP4CQ96CF2 RNY4P3-201ENST00000365254 95 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 RNU6-44P-201ENST00000384045 107 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 RNU6-154P-201ENST00000384306 106 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 MIR876-201ENST00000401147 81 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 RNU6-719P-201ENST00000516671 104 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 MIR548AE1-201ENST00000583292 70 ntBASIC-0.03□□□□□ -2.41
CHMP4CQ96CF2 RNU6-161P-201ENST00000363051 106 ntBASIC-0.04□□□□□ -2.42
CHMP4CQ96CF2 SNORD114-29-201ENST00000364819 70 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 833 ms