Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RNU6-1152P-201ENST00000384576 107 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 RNU6-466P-201ENST00000391224 103 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZNF428Q96B54 SNORD71-201ENST00000411292 86 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 SNORA18.5-201ENST00000516616 101 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 MIR3920-201ENST00000581751 86 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 AC104996.3-201ENST00000590718 94 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 MTRNR2L2-201ENST00000604882 87 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
ZNF428Q96B54 RNA5SP499-201ENST00000363982 119 ntBASIC0.88□□□□□ -2.27
ZNF428Q96B54 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
ZNF428Q96B54 RNA5SP47-201ENST00000517230 109 ntBASIC0.88□□□□□ -2.27
ZNF428Q96B54 Y_RNA.207-201ENST00000364142 106 ntBASIC0.87□□□□□ -2.27
ZNF428Q96B54 VTRNA1-3-201ENST00000365645 89 ntBASIC0.87□□□□□ -2.27
ZNF428Q96B54 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
ZNF428Q96B54 RNU6-287P-201ENST00000516230 98 ntBASIC0.87□□□□□ -2.27
ZNF428Q96B54 RNA5SP285-201ENST00000516619 119 ntBASIC0.87□□□□□ -2.27
ZNF428Q96B54 RNU6-664P-201ENST00000362381 107 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 RNU6-811P-201ENST00000384069 107 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 SNORA40.8-201ENST00000411034 126 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 RNU6-1052P-201ENST00000411398 104 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 snoU13.17-201ENST00000458802 104 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 RNU4-54P-201ENST00000516428 129 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 RNU6-719P-201ENST00000516671 104 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 MIR4752-201ENST00000579672 72 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 MIR6828-201ENST00000636181 60 ntBASIC0.86□□□□□ -2.27
ZNF428Q96B54 RNU6-228P-201ENST00000362700 106 ntBASIC0.85□□□□□ -2.27
ZNF428Q96B54 Y_RNA.313-201ENST00000365095 103 ntBASIC0.85□□□□□ -2.27
ZNF428Q96B54 SNORD101-201ENST00000384027 73 ntBASIC0.85□□□□□ -2.27
ZNF428Q96B54 MIR519C-201ENST00000385053 87 ntBASIC0.85□□□□□ -2.27
ZNF428Q96B54 RNA5SP225-201ENST00000410874 135 ntBASIC0.85□□□□□ -2.27
ZNF428Q96B54 RNU6-478P-201ENST00000363904 110 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 Y_RNA.491-201ENST00000384417 107 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 RNU6-30P-201ENST00000384561 107 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 AL450471.1-201ENST00000447509 127 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.84□□□□□ -2.27
ZNF428Q96B54 MIR4796-201ENST00000580742 81 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 MIR7107-201ENST00000611489 80 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.84□□□□□ -2.27
ZNF428Q96B54 RNU6-726P-201ENST00000364680 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNA5SP517-201ENST00000364724 117 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-1276P-201ENST00000365372 104 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-1126P-201ENST00000384002 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-820P-201ENST00000384273 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 MIR2113-201ENST00000459007 91 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-848P-201ENST00000515948 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-617P-201ENST00000516147 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-473P-201ENST00000516164 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 SNORA25.13-201ENST00000516395 103 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-1049P-201ENST00000516414 107 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-229P-201ENST00000516614 102 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 AC140658.3-201ENST00000567603 271 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
ZNF428Q96B54 RNU6-945P-201ENST00000383947 107 ntBASIC0.82□□□□□ -2.28
ZNF428Q96B54 MIR1302-4-201ENST00000408701 150 ntBASIC0.82□□□□□ -2.28
ZNF428Q96B54 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
ZNF428Q96B54 Y_RNA.596-201ENST00000410462 109 ntBASIC0.82□□□□□ -2.28
ZNF428Q96B54 MIR519E-201ENST00000385075 84 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 MIR548L-201ENST00000408303 86 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 MIR1236-201ENST00000408340 102 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 RNU1-29P-201ENST00000606574 126 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 AC067863.3-201ENST00000624172 122 ntBASIC0.81□□□□□ -2.28
ZNF428Q96B54 AC090625.1-201ENST00000357130 210 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 Y_RNA.239-201ENST00000364444 113 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 MIR451A-201ENST00000385059 72 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 RNU6-269P-201ENST00000391077 97 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 RNU7-171P-201ENST00000459581 62 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 FGF7P7-201ENST00000514120 227 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 RNU7-13P-201ENST00000516413 62 ntBASIC0.8□□□□□ -2.28
ZNF428Q96B54 Y_RNA.316-201ENST00000365118 111 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 RNU6-652P-201ENST00000365488 107 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 SNORA24B-201ENST00000384176 131 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 Y_RNA.532-201ENST00000384590 113 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 snoU13.19-201ENST00000459148 104 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 RNU6-1108P-201ENST00000516308 104 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 MIR4636-201ENST00000582271 80 ntBASIC0.79□□□□□ -2.28
ZNF428Q96B54 RNA5SP331-201ENST00000364986 107 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 Y_RNA.437-201ENST00000384113 113 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 RNU6-1124P-201ENST00000384169 107 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 SNORA8.2-201ENST00000384372 139 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 MIR518A1-201ENST00000385068 85 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 MIR548U-201ENST00000390728 81 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 MIR1255A-201ENST00000408338 113 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 AC093729.1-201ENST00000513074 128 ntBASIC0.78□□□□□ -2.28
ZNF428Q96B54 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 SNORD115-37-201ENST00000363768 82 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 RNY4P3-201ENST00000365254 95 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 RNU6-1051P-201ENST00000365471 102 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 SNORD41.1-201ENST00000391000 69 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 RNA5SP484-201ENST00000458857 111 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 RNU6-1232P-201ENST00000516299 86 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 RNA5SP268-201ENST00000516828 124 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 SNORA70.25-201ENST00000612741 95 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.77□□□□□ -2.29
ZNF428Q96B54 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms