Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFRSF25Q93038 AC244669.1-204ENST00000621564 178 ntBASIC1.55□□□□□ -2.16
TNFRSF25Q93038 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFRSF25Q93038 RNU6-645P-201ENST00000364649 106 ntBASIC1.54□□□□□ -2.16
TNFRSF25Q93038 MIR633-201ENST00000384821 98 ntBASIC1.54□□□□□ -2.16
TNFRSF25Q93038 RNU6-542P-201ENST00000516405 103 ntBASIC1.54□□□□□ -2.16
TNFRSF25Q93038 AC104984.5-201ENST00000586878 94 ntBASIC1.54□□□□□ -2.16
TNFRSF25Q93038 RNU6-669P-201ENST00000365575 107 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 SNORD28-201ENST00000384706 75 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 MIR7-2-201ENST00000384970 110 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 RNA5SP147-201ENST00000516493 109 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 MIR4460-201ENST00000577862 86 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
TNFRSF25Q93038 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
TNFRSF25Q93038 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
TNFRSF25Q93038 SNORA25-201ENST00000384384 134 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 SNORD105-201ENST00000386910 85 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 SNORD41.1-201ENST00000391000 69 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 RNU6-482P-201ENST00000391068 107 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 RNU6-1110P-201ENST00000516462 101 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
TNFRSF25Q93038 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TNFRSF25Q93038 RNU6-716P-201ENST00000365621 103 ntBASIC1.5□□□□□ -2.17
TNFRSF25Q93038 Y_RNA.375-201ENST00000365625 101 ntBASIC1.5□□□□□ -2.17
TNFRSF25Q93038 MT-TY-201ENST00000387409 66 ntBASIC1.5□□□□□ -2.17
TNFRSF25Q93038 SNORA2.1-201ENST00000363089 137 ntBASIC1.49□□□□□ -2.17
TNFRSF25Q93038 FABP5P4-201ENST00000437203 171 ntBASIC1.49□□□□□ -2.17
TNFRSF25Q93038 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
TNFRSF25Q93038 AC092634.7-201ENST00000621022 103 ntBASIC1.49□□□□□ -2.17
TNFRSF25Q93038 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TNFRSF25Q93038 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
TNFRSF25Q93038 RNU6-990P-201ENST00000364385 104 ntBASIC1.48□□□□□ -2.17
TNFRSF25Q93038 RNU6-614P-201ENST00000384369 107 ntBASIC1.48□□□□□ -2.17
TNFRSF25Q93038 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.48□□□□□ -2.17
TNFRSF25Q93038 U6.59-201ENST00000615686 107 ntBASIC1.48□□□□□ -2.17
TNFRSF25Q93038 SNORD18A-201ENST00000363753 72 ntBASIC1.47□□□□□ -2.17
TNFRSF25Q93038 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
TNFRSF25Q93038 SNORA25.5-201ENST00000363782 126 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 RNU6-726P-201ENST00000364680 107 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TNFRSF25Q93038 AC079150.2-201ENST00000443733 78 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 U7.7-201ENST00000459276 60 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 RNA5SP47-201ENST00000517230 109 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 MIR3678-201ENST00000578455 94 ntBASIC1.46□□□□□ -2.18
TNFRSF25Q93038 RNA5SP299-201ENST00000391203 116 ntBASIC1.45□□□□□ -2.18
TNFRSF25Q93038 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
TNFRSF25Q93038 RNU1-92P-201ENST00000517017 135 ntBASIC1.45□□□□□ -2.18
TNFRSF25Q93038 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TNFRSF25Q93038 RNA5SP192-201ENST00000364404 120 ntBASIC1.44□□□□□ -2.18
TNFRSF25Q93038 RNU1-141P-201ENST00000364623 158 ntBASIC1.44□□□□□ -2.18
TNFRSF25Q93038 RNU5B-6P-201ENST00000516765 68 ntBASIC1.44□□□□□ -2.18
TNFRSF25Q93038 RNU6-656P-201ENST00000516785 107 ntBASIC1.44□□□□□ -2.18
TNFRSF25Q93038 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFRSF25Q93038 SNORD114-4-201ENST00000363962 75 ntBASIC1.43□□□□□ -2.18
TNFRSF25Q93038 RNU6-269P-201ENST00000391077 97 ntBASIC1.43□□□□□ -2.18
TNFRSF25Q93038 RNU6-141P-201ENST00000410499 105 ntBASIC1.43□□□□□ -2.18
TNFRSF25Q93038 MIR3612-201ENST00000579753 87 ntBASIC1.43□□□□□ -2.18
TNFRSF25Q93038 RNA5SP215-201ENST00000363440 122 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 RNU6-1335P-201ENST00000365426 107 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 MIR573-201ENST00000384964 99 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TNFRSF25Q93038 AL603825.1-201ENST00000438481 80 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 SCARNA21.1-201ENST00000515996 128 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 SNORA40.17-201ENST00000517256 115 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 AC018659.1-201ENST00000551083 169 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 MIR466-201ENST00000580653 84 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 MIR6739-201ENST00000622461 75 ntBASIC1.42□□□□□ -2.18
TNFRSF25Q93038 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
TNFRSF25Q93038 RNU6-1079P-201ENST00000362861 110 ntBASIC1.41□□□□□ -2.18
TNFRSF25Q93038 RNU6-940P-201ENST00000363433 104 ntBASIC1.41□□□□□ -2.18
TNFRSF25Q93038 RNU6-1089P-201ENST00000516473 104 ntBASIC1.41□□□□□ -2.18
TNFRSF25Q93038 MIR548V-201ENST00000584165 80 ntBASIC1.41□□□□□ -2.18
TNFRSF25Q93038 SNORA8.2-201ENST00000384372 139 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 MIR548C-201ENST00000384815 97 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 RNA5SP484-201ENST00000458857 111 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 RNU6-237P-201ENST00000515985 71 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 SCARNA16.5-201ENST00000517114 183 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.4□□□□□ -2.19
TNFRSF25Q93038 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
TNFRSF25Q93038 RNU6-1162P-201ENST00000384443 104 ntBASIC1.39□□□□□ -2.19
TNFRSF25Q93038 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
TNFRSF25Q93038 snoU13.13-201ENST00000458842 104 ntBASIC1.39□□□□□ -2.19
TNFRSF25Q93038 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.39□□□□□ -2.19
TNFRSF25Q93038 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
TNFRSF25Q93038 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TNFRSF25Q93038 RNU6-302P-201ENST00000365249 107 ntBASIC1.38□□□□□ -2.19
TNFRSF25Q93038 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
TNFRSF25Q93038 MIR200A-201ENST00000384875 90 ntBASIC1.38□□□□□ -2.19
TNFRSF25Q93038 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
TNFRSF25Q93038 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
TNFRSF25Q93038 RNU6-829P-201ENST00000363700 112 ntBASIC1.37□□□□□ -2.19
TNFRSF25Q93038 Y_RNA.250-201ENST00000364542 110 ntBASIC1.37□□□□□ -2.19
TNFRSF25Q93038 AL157398.1-201ENST00000452981 186 ntBASIC1.36□□□□□ -2.19
TNFRSF25Q93038 RNA5SP227-201ENST00000516184 113 ntBASIC1.36□□□□□ -2.19
TNFRSF25Q93038 AC025627.3-201ENST00000582078 182 ntBASIC1.36□□□□□ -2.19
TNFRSF25Q93038 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms