Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-110P-201ENST00000384508 104 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 RNU6-1052P-201ENST00000411398 104 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
BRF1Q92994 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 RNU6-719P-201ENST00000516671 104 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 YWHAEP2-201ENST00000580066 112 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 YWHAEP3-201ENST00000582767 121 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 AL162376.1-201ENST00000624117 175 ntBASIC0.96□□□□□ -2.26
BRF1Q92994 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
BRF1Q92994 Y_RNA.244-201ENST00000364484 109 ntBASIC0.95□□□□□ -2.26
BRF1Q92994 SNORA8.2-201ENST00000384372 139 ntBASIC0.95□□□□□ -2.26
BRF1Q92994 Y_RNA.606-201ENST00000410579 103 ntBASIC0.95□□□□□ -2.26
BRF1Q92994 RNA5SP268-201ENST00000516828 124 ntBASIC0.95□□□□□ -2.26
BRF1Q92994 RNU6-303P-201ENST00000517091 106 ntBASIC0.94□□□□□ -2.26
BRF1Q92994 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
BRF1Q92994 MIR548O2-201ENST00000616090 70 ntBASIC0.94□□□□□ -2.26
BRF1Q92994 MIR1297-201ENST00000637311 77 ntBASIC0.94□□□□□ -2.26
BRF1Q92994 Y_RNA.12-201ENST00000362393 112 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 RNU6-1177P-201ENST00000391058 104 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 RNU6-269P-201ENST00000391077 97 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 RNA5SP227-201ENST00000516184 113 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
BRF1Q92994 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
BRF1Q92994 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
BRF1Q92994 RNU6-340P-201ENST00000364005 107 ntBASIC0.91□□□□□ -2.26
BRF1Q92994 RNU1-141P-201ENST00000364623 158 ntBASIC0.91□□□□□ -2.26
BRF1Q92994 RNA5SP247-201ENST00000411181 105 ntBASIC0.91□□□□□ -2.26
BRF1Q92994 AC074348.1-201ENST00000426503 132 ntBASIC0.91□□□□□ -2.26
BRF1Q92994 U6.81-201ENST00000612550 106 ntBASIC0.91□□□□□ -2.26
BRF1Q92994 RNU6-681P-201ENST00000364012 104 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 Y_RNA.532-201ENST00000384590 113 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 MIR499A-201ENST00000384903 122 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 RNU6-807P-201ENST00000516805 107 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 MIR7107-201ENST00000611489 80 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 MIR4662A-201ENST00000637499 67 ntBASIC0.9□□□□□ -2.27
BRF1Q92994 RNU6-824P-201ENST00000363724 104 ntBASIC0.89□□□□□ -2.27
BRF1Q92994 RNU7-24P-201ENST00000458867 62 ntBASIC0.89□□□□□ -2.27
BRF1Q92994 AC145423.2-201ENST00000610631 239 ntBASIC0.89□□□□□ -2.27
BRF1Q92994 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
BRF1Q92994 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
BRF1Q92994 MIR1276-201ENST00000408707 83 ntBASIC0.88□□□□□ -2.27
BRF1Q92994 AC073869.9-201ENST00000641610 120 ntBASIC0.88□□□□□ -2.27
BRF1Q92994 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 Y_RNA.371-201ENST00000365591 113 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 MIR4460-201ENST00000577862 86 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 U7.4-201ENST00000614961 63 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
BRF1Q92994 RNU6-495P-201ENST00000362995 107 ntBASIC0.86□□□□□ -2.27
BRF1Q92994 Y_RNA.226-201ENST00000364337 114 ntBASIC0.86□□□□□ -2.27
BRF1Q92994 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
BRF1Q92994 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
BRF1Q92994 AC092634.7-201ENST00000621022 103 ntBASIC0.86□□□□□ -2.27
BRF1Q92994 Y_RNA.36-201ENST00000362602 112 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 SNORD75.2-201ENST00000408784 58 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 RNA5SP484-201ENST00000458857 111 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 AL078603.1-201ENST00000603824 313 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 AC069503.3-201ENST00000618674 145 ntBASIC0.85□□□□□ -2.27
BRF1Q92994 RNU6-776P-201ENST00000364403 104 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 RNU6-1022P-201ENST00000365049 104 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 SNORD114-22-201ENST00000365423 72 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 SCARNA18B-201ENST00000458806 135 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
BRF1Q92994 MIR6504-201ENST00000613520 61 ntBASIC0.84□□□□□ -2.27
BRF1Q92994 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
BRF1Q92994 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
BRF1Q92994 RNU6-382P-201ENST00000365181 106 ntBASIC0.83□□□□□ -2.28
BRF1Q92994 RNU6V-201ENST00000384105 107 ntBASIC0.83□□□□□ -2.28
BRF1Q92994 RNU6-1296P-201ENST00000383879 107 ntBASIC0.82□□□□□ -2.28
BRF1Q92994 RNU6-154P-201ENST00000384306 106 ntBASIC0.82□□□□□ -2.28
BRF1Q92994 SNORA40.8-201ENST00000411034 126 ntBASIC0.82□□□□□ -2.28
BRF1Q92994 RNU6-752P-201ENST00000516376 102 ntBASIC0.82□□□□□ -2.28
BRF1Q92994 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.82□□□□□ -2.28
BRF1Q92994 Y_RNA.224-201ENST00000364308 111 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 RNU6-54P-201ENST00000365563 107 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 RNU6-274P-201ENST00000459566 107 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 NAMPTP3-201ENST00000569273 224 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 MIR4484-201ENST00000582855 83 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 MIR4773-1-201ENST00000637203 78 ntBASIC0.81□□□□□ -2.28
BRF1Q92994 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
BRF1Q92994 Y_RNA.788-201ENST00000622394 112 ntBASIC0.8□□□□□ -2.28
BRF1Q92994 MIR5706-201ENST00000579841 80 ntBASIC0.79□□□□□ -2.28
BRF1Q92994 MIR4452-201ENST00000583004 71 ntBASIC0.79□□□□□ -2.28
BRF1Q92994 SNORA25.18-201ENST00000607153 114 ntBASIC0.79□□□□□ -2.28
BRF1Q92994 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.79□□□□□ -2.28
BRF1Q92994 MIR518A1-201ENST00000385068 85 ntBASIC0.78□□□□□ -2.28
BRF1Q92994 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
BRF1Q92994 RNA5SP220-201ENST00000516298 104 ntBASIC0.78□□□□□ -2.28
BRF1Q92994 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
BRF1Q92994 RNU1-29P-201ENST00000606574 126 ntBASIC0.78□□□□□ -2.28
BRF1Q92994 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms