Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SNORD18A-201ENST00000363753 72 ntBASIC1□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-1126P-201ENST00000384002 107 ntBASIC1□□□□□ -2.25
SHCBP1Q8NEM2 Y_RNA.660-201ENST00000516002 120 ntBASIC1□□□□□ -2.25
SHCBP1Q8NEM2 AC244669.1-204ENST00000621564 178 ntBASIC1□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-1052P-201ENST00000411398 104 ntBASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 MIR2113-201ENST00000459007 91 ntBASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-719P-201ENST00000516671 104 ntBASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 MIR3678-201ENST00000578455 94 ntBASIC0.99□□□□□ -2.25
SHCBP1Q8NEM2 RNU5F-1-201ENST00000362507 117 ntBASIC0.98□□□□□ -2.25
SHCBP1Q8NEM2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SHCBP1Q8NEM2 AC244098.3-201ENST00000424803 96 ntBASIC0.98□□□□□ -2.25
SHCBP1Q8NEM2 AC067863.3-201ENST00000624172 122 ntBASIC0.98□□□□□ -2.25
SHCBP1Q8NEM2 RNY4P3-201ENST00000365254 95 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 SNORA24B-201ENST00000384176 131 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 Y_RNA.532-201ENST00000384590 113 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 MIR193B-201ENST00000384907 83 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-1057P-201ENST00000517162 102 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 RNA5SP47-201ENST00000517230 109 ntBASIC0.97□□□□□ -2.25
SHCBP1Q8NEM2 MIR18A-201ENST00000362310 71 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-1094P-201ENST00000362416 104 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 Y_RNA.264-201ENST00000364665 102 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
SHCBP1Q8NEM2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SHCBP1Q8NEM2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
SHCBP1Q8NEM2 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
SHCBP1Q8NEM2 MIR519E-201ENST00000385075 84 ntBASIC0.94□□□□□ -2.26
SHCBP1Q8NEM2 MIR1273G-201ENST00000577677 100 ntBASIC0.94□□□□□ -2.26
SHCBP1Q8NEM2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
SHCBP1Q8NEM2 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
SHCBP1Q8NEM2 Y_RNA.12-201ENST00000362393 112 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-776P-201ENST00000364403 104 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-726P-201ENST00000364680 107 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-1022P-201ENST00000365049 104 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 SNORD41.1-201ENST00000391000 69 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 U3.27-201ENST00000391237 200 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 MIR889-201ENST00000401280 79 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 AC145423.2-201ENST00000610631 239 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 Y_RNA.788-201ENST00000622394 112 ntBASIC0.93□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-716P-201ENST00000365621 103 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 MIR548L-201ENST00000408303 86 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 RNU6-380P-201ENST00000410207 107 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 SCARNA18B-201ENST00000458806 135 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 YWHAEP2-201ENST00000580066 112 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 YWHAEP3-201ENST00000582767 121 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 MIR4662A-201ENST00000637499 67 ntBASIC0.92□□□□□ -2.26
SHCBP1Q8NEM2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
SHCBP1Q8NEM2 MIR4484-201ENST00000582855 83 ntBASIC0.91□□□□□ -2.26
SHCBP1Q8NEM2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SHCBP1Q8NEM2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-824P-201ENST00000363724 104 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 Y_RNA.371-201ENST00000365591 113 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-1296P-201ENST00000383879 107 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 AC097510.1-201ENST00000510945 133 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-303P-201ENST00000517091 106 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
SHCBP1Q8NEM2 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 RNA5SP457-201ENST00000363657 124 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-340P-201ENST00000364005 107 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 RNU4-45P-201ENST00000365469 141 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-1177P-201ENST00000391058 104 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 RNU2-59P-201ENST00000410482 191 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 AC074348.1-201ENST00000426503 132 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 U7.4-201ENST00000614961 63 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
SHCBP1Q8NEM2 Y_RNA.606-201ENST00000410579 103 ntBASIC0.88□□□□□ -2.27
SHCBP1Q8NEM2 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-807P-201ENST00000516805 107 ntBASIC0.88□□□□□ -2.27
SHCBP1Q8NEM2 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
SHCBP1Q8NEM2 U6.81-201ENST00000612550 106 ntBASIC0.88□□□□□ -2.27
SHCBP1Q8NEM2 Y_RNA.178-201ENST00000363832 102 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 AC093423.1-201ENST00000440817 142 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 RNU7-74P-201ENST00000459104 62 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 MIR1297-201ENST00000637311 77 ntBASIC0.87□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-269P-201ENST00000391077 97 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 MIR3134-201ENST00000579433 74 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 MIR548O2-201ENST00000616090 70 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 MIR924-201ENST00000638017 53 ntBASIC0.86□□□□□ -2.27
SHCBP1Q8NEM2 SNORD114-23-201ENST00000363536 72 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-154P-201ENST00000384306 106 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 RNA5SP227-201ENST00000516184 113 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 RNA5SP268-201ENST00000516828 124 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 AL162376.1-201ENST00000624117 175 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms