Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNORA25.9-201ENST00000365087 128 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 SNORD77.2-201ENST00000391045 68 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 MIR548O2-201ENST00000616090 70 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 MIR8070-201ENST00000616510 88 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
HIPK4Q8NE63 RNU6-208P-201ENST00000362431 107 ntBASIC0.71□□□□□ -2.3
HIPK4Q8NE63 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HIPK4Q8NE63 MIR4712-201ENST00000583750 82 ntBASIC0.71□□□□□ -2.3
HIPK4Q8NE63 MIR518A1-201ENST00000385068 85 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MT-TY-201ENST00000387409 66 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MIR1255A-201ENST00000408338 113 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MIR1276-201ENST00000408707 83 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 AC069271.1-201ENST00000445577 156 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 Y_RNA.660-201ENST00000516002 120 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 RNU1-29P-201ENST00000606574 126 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 MIR6504-201ENST00000613520 61 ntBASIC0.7□□□□□ -2.3
HIPK4Q8NE63 RNU6-315P-201ENST00000362666 107 ntBASIC0.69□□□□□ -2.3
HIPK4Q8NE63 Y_RNA.94-201ENST00000363068 106 ntBASIC0.69□□□□□ -2.3
HIPK4Q8NE63 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
HIPK4Q8NE63 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.69□□□□□ -2.3
HIPK4Q8NE63 AC073869.9-201ENST00000641610 120 ntBASIC0.69□□□□□ -2.3
HIPK4Q8NE63 MIRLET7A1-201ENST00000362295 80 ntBASIC0.68□□□□□ -2.3
HIPK4Q8NE63 RNA5SP395-201ENST00000516567 118 ntBASIC0.68□□□□□ -2.3
HIPK4Q8NE63 NAMPTP3-201ENST00000569273 224 ntBASIC0.68□□□□□ -2.3
HIPK4Q8NE63 MIR4460-201ENST00000577862 86 ntBASIC0.68□□□□□ -2.3
HIPK4Q8NE63 SNORA70.25-201ENST00000612741 95 ntBASIC0.68□□□□□ -2.3
HIPK4Q8NE63 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HIPK4Q8NE63 RNU6-824P-201ENST00000363724 104 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 Y_RNA.258-201ENST00000364613 105 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 Y_RNA.264-201ENST00000364665 102 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 RNU6-686P-201ENST00000364839 107 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 RNU6-1177P-201ENST00000391058 104 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 RNU6-1275P-201ENST00000391087 107 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 SNORD71-201ENST00000411292 86 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
HIPK4Q8NE63 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HIPK4Q8NE63 RNU6V-201ENST00000384105 107 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 RNU2-59P-201ENST00000410482 191 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 RNA5SP225-201ENST00000410874 135 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 AC097510.1-201ENST00000510945 133 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 Y_RNA.685-201ENST00000516532 108 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 MIR4452-201ENST00000583004 71 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
HIPK4Q8NE63 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 RNU6-54P-201ENST00000365563 107 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.676-201ENST00000516393 96 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
HIPK4Q8NE63 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
HIPK4Q8NE63 RNU6-279P-201ENST00000391297 101 ntBASIC0.64□□□□□ -2.31
HIPK4Q8NE63 U6.81-201ENST00000612550 106 ntBASIC0.64□□□□□ -2.31
HIPK4Q8NE63 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.12-201ENST00000362393 112 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.532-201ENST00000384590 113 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 SNORD110-201ENST00000408189 75 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 AC006210.1-201ENST00000424882 111 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 RPS29P1-201ENST00000465274 159 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
HIPK4Q8NE63 RNU5B-6P-201ENST00000516765 68 ntBASIC0.62□□□□□ -2.31
HIPK4Q8NE63 YWHAEP2-201ENST00000580066 112 ntBASIC0.62□□□□□ -2.31
HIPK4Q8NE63 YWHAEP3-201ENST00000582767 121 ntBASIC0.62□□□□□ -2.31
HIPK4Q8NE63 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
HIPK4Q8NE63 RNU6-495P-201ENST00000362995 107 ntBASIC0.61□□□□□ -2.31
HIPK4Q8NE63 RNU6-340P-201ENST00000364005 107 ntBASIC0.61□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.371-201ENST00000365591 113 ntBASIC0.61□□□□□ -2.31
HIPK4Q8NE63 RNU6-857P-201ENST00000515893 110 ntBASIC0.61□□□□□ -2.31
HIPK4Q8NE63 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.224-201ENST00000364308 111 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 RNU6-382P-201ENST00000365181 106 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 SNORD75.2-201ENST00000408784 58 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
HIPK4Q8NE63 RNU7-24P-201ENST00000458867 62 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 SNORD42B-201ENST00000458893 67 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 MIR5706-201ENST00000579841 80 ntBASIC0.6□□□□□ -2.31
HIPK4Q8NE63 SNORD44.1-201ENST00000363202 61 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 Y_RNA.423-201ENST00000384057 113 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 RNU6-303P-201ENST00000517091 106 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
HIPK4Q8NE63 AC074348.1-201ENST00000426503 132 ntBASIC0.58□□□□□ -2.32
HIPK4Q8NE63 HMGN2P22-201ENST00000427588 175 ntBASIC0.58□□□□□ -2.32
HIPK4Q8NE63 RNU6-1232P-201ENST00000516299 86 ntBASIC0.58□□□□□ -2.32
HIPK4Q8NE63 MIR4773-1-201ENST00000637203 78 ntBASIC0.58□□□□□ -2.32
HIPK4Q8NE63 RNU6-1094P-201ENST00000362416 104 ntBASIC0.57□□□□□ -2.32
HIPK4Q8NE63 SNORA2A-201ENST00000383885 135 ntBASIC0.57□□□□□ -2.32
HIPK4Q8NE63 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms