Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR644A-201ENST00000385262 94 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 MT-TY-201ENST00000387409 66 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 Y_RNA.722-201ENST00000517279 114 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
SCUBE3Q8IX30 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 RNU6-122P-201ENST00000516818 107 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 SNORA70.22-201ENST00000517160 124 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 SNORA40.17-201ENST00000517256 115 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 MIR4460-201ENST00000577862 86 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 MIR3938-201ENST00000582157 103 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 MIR4639-201ENST00000584938 69 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 RNU6-92P-201ENST00000605893 104 ntBASIC1.94□□□□□ -2.1
SCUBE3Q8IX30 RNU6-990P-201ENST00000364385 104 ntBASIC1.93□□□□□ -2.1
SCUBE3Q8IX30 RNU6-302P-201ENST00000365249 107 ntBASIC1.93□□□□□ -2.1
SCUBE3Q8IX30 AC244669.1-204ENST00000621564 178 ntBASIC1.93□□□□□ -2.1
SCUBE3Q8IX30 SNORA7.1-201ENST00000363750 139 ntBASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 SNORD28-201ENST00000384706 75 ntBASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.92□□□□□ -2.1
SCUBE3Q8IX30 SNORD114-4-201ENST00000363962 75 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 Y_RNA.250-201ENST00000364542 110 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 SNORD12-201ENST00000391002 90 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNU6-808P-201ENST00000391233 108 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 MIR548L-201ENST00000408303 86 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNU6-469P-201ENST00000516253 101 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 MIR7978-201ENST00000636158 59 ntBASIC1.91□□□□□ -2.1
SCUBE3Q8IX30 RNU6-1162P-201ENST00000384443 104 ntBASIC1.9□□□□□ -2.11
SCUBE3Q8IX30 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
SCUBE3Q8IX30 AC018659.1-201ENST00000551083 169 ntBASIC1.9□□□□□ -2.11
SCUBE3Q8IX30 SNORA67.5-201ENST00000391036 107 ntBASIC1.89□□□□□ -2.11
SCUBE3Q8IX30 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
SCUBE3Q8IX30 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
SCUBE3Q8IX30 MIR548V-201ENST00000584165 80 ntBASIC1.89□□□□□ -2.11
SCUBE3Q8IX30 RNU1-141P-201ENST00000364623 158 ntBASIC1.88□□□□□ -2.11
SCUBE3Q8IX30 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
SCUBE3Q8IX30 SNORD13-201ENST00000459299 104 ntBASIC1.88□□□□□ -2.11
SCUBE3Q8IX30 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
SCUBE3Q8IX30 RNU6-726P-201ENST00000364680 107 ntBASIC1.87□□□□□ -2.11
SCUBE3Q8IX30 MIR521-2-201ENST00000384818 87 ntBASIC1.87□□□□□ -2.11
SCUBE3Q8IX30 RNU4-62P-201ENST00000410125 130 ntBASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 AC002429.1-201ENST00000437672 148 ntBASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCUBE3Q8IX30 Y_RNA.224-201ENST00000364308 111 ntBASIC1.85□□□□□ -2.11
SCUBE3Q8IX30 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SCUBE3Q8IX30 SNORD60.1-201ENST00000362451 73 ntBASIC1.84□□□□□ -2.11
SCUBE3Q8IX30 MIR548C-201ENST00000384815 97 ntBASIC1.84□□□□□ -2.11
SCUBE3Q8IX30 SNORD113-4-201ENST00000364802 75 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 RNU6-936P-201ENST00000384005 107 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 MIR630-201ENST00000384957 97 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 SNORA75.1-201ENST00000391130 148 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 AL157398.1-201ENST00000452981 186 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 RNU6-1110P-201ENST00000516462 101 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 RNU5B-6P-201ENST00000516765 68 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 RNA5SP47-201ENST00000517230 109 ntBASIC1.83□□□□□ -2.12
SCUBE3Q8IX30 SNORD18A-201ENST00000363753 72 ntBASIC1.82□□□□□ -2.12
SCUBE3Q8IX30 SNORA8.2-201ENST00000384372 139 ntBASIC1.82□□□□□ -2.12
SCUBE3Q8IX30 SNORD89-201ENST00000390981 114 ntBASIC1.82□□□□□ -2.12
SCUBE3Q8IX30 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.82□□□□□ -2.12
SCUBE3Q8IX30 MIR6504-201ENST00000613520 61 ntBASIC1.82□□□□□ -2.12
SCUBE3Q8IX30 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
SCUBE3Q8IX30 MIR222-201ENST00000384992 110 ntBASIC1.81□□□□□ -2.12
SCUBE3Q8IX30 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
SCUBE3Q8IX30 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
SCUBE3Q8IX30 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
SCUBE3Q8IX30 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 RNU6-716P-201ENST00000365621 103 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 Y_RNA.540-201ENST00000384638 111 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 MIR517B-201ENST00000385102 67 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 SNORD105-201ENST00000386910 85 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 RNU6-269P-201ENST00000391077 97 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 MIR1276-201ENST00000408707 83 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 snoU13.13-201ENST00000458842 104 ntBASIC1.8□□□□□ -2.12
SCUBE3Q8IX30 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
SCUBE3Q8IX30 RNU6-1184P-201ENST00000384588 108 ntBASIC1.79□□□□□ -2.12
SCUBE3Q8IX30 SNORD113-2-201ENST00000391082 72 ntBASIC1.79□□□□□ -2.12
SCUBE3Q8IX30 U7.7-201ENST00000459276 60 ntBASIC1.79□□□□□ -2.12
SCUBE3Q8IX30 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SCUBE3Q8IX30 SNORA15B-2-201ENST00000384058 135 ntBASIC1.78□□□□□ -2.12
SCUBE3Q8IX30 SNORA15B-1-201ENST00000384334 135 ntBASIC1.78□□□□□ -2.12
SCUBE3Q8IX30 MIR3678-201ENST00000578455 94 ntBASIC1.78□□□□□ -2.12
SCUBE3Q8IX30 RNU6-698P-201ENST00000363523 107 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 RNU6-34P-201ENST00000364874 107 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 FABP5P4-201ENST00000437203 171 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 RNU1-92P-201ENST00000517017 135 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.77□□□□□ -2.13
SCUBE3Q8IX30 RNU7-95P-201ENST00000459222 64 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms