Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SNORD114-17-201ENST00000364699 75 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 RNU6-132P-201ENST00000383863 107 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 FGF7P7-201ENST00000514120 227 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 AC022559.1-201ENST00000520905 205 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 AL117187.1-201ENST00000555482 181 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 AC141273.2-201ENST00000618989 130 ntBASIC-1.18□□□□□ -2.6
LRRC28Q86X40 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 MIR124-2-201ENST00000385081 109 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 MIR3140-201ENST00000583685 90 ntBASIC-1.19□□□□□ -2.6
LRRC28Q86X40 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.19□□□□□ -2.6
LRRC28Q86X40 RNU6-915P-201ENST00000364943 103 ntBASIC-1.2□□□□□ -2.6
LRRC28Q86X40 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.2□□□□□ -2.6
LRRC28Q86X40 RNU6-460P-201ENST00000391158 108 ntBASIC-1.2□□□□□ -2.6
LRRC28Q86X40 RNU6-65P-201ENST00000516332 98 ntBASIC-1.2□□□□□ -2.6
LRRC28Q86X40 MIR4536-1-201ENST00000583537 88 ntBASIC-1.2□□□□□ -2.6
LRRC28Q86X40 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 MIR577-201ENST00000385196 96 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 MIR1263-201ENST00000408324 86 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 SNORD75.2-201ENST00000408784 58 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 AC021146.9-201ENST00000512503 156 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 RNU6-111P-201ENST00000517179 105 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 AL445584.3-201ENST00000617173 78 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 MIR6888-201ENST00000621977 67 ntBASIC-1.21□□□□□ -2.6
LRRC28Q86X40 RNU6-208P-201ENST00000362431 107 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 RNU6-816P-201ENST00000390914 107 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 RNU6-781P-201ENST00000516377 101 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 AL513043.2-201ENST00000573941 143 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 MIR3064-201ENST00000581130 66 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 MIR3128-201ENST00000581957 66 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 AL353803.5-201ENST00000599815 141 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 MIR4320-201ENST00000636981 65 ntBASIC-1.22□□□□□ -2.6
LRRC28Q86X40 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 RNU4-11P-201ENST00000365287 132 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.23□□□□□ -2.61
LRRC28Q86X40 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
LRRC28Q86X40 snoU83B.1-201ENST00000517136 88 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 MIR4306-201ENST00000583390 91 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 AP001340.1-201ENST00000624405 217 ntBASIC-1.24□□□□□ -2.61
LRRC28Q86X40 RNY4P6-201ENST00000363667 96 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 RNA5SP192-201ENST00000364404 120 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 MIR548A1-201ENST00000385041 97 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 U6.96-201ENST00000636425 70 ntBASIC-1.25□□□□□ -2.61
LRRC28Q86X40 MIR29B1-201ENST00000385015 81 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 AL158147.1-201ENST00000443970 75 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 AC068339.1-201ENST00000526965 141 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 MIR4694-201ENST00000578534 80 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 AC104996.3-201ENST00000590718 94 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 AC044792.1-201ENST00000593294 196 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 AC072026.1-201ENST00000605023 201 ntBASIC-1.26□□□□□ -2.61
LRRC28Q86X40 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.27□□□□□ -2.61
LRRC28Q86X40 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.27□□□□□ -2.61
LRRC28Q86X40 MIR3613-201ENST00000579844 87 ntBASIC-1.27□□□□□ -2.61
LRRC28Q86X40 AL627230.5-201ENST00000619807 58 ntBASIC-1.27□□□□□ -2.61
LRRC28Q86X40 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
LRRC28Q86X40 RNU6-832P-201ENST00000363319 107 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 MIR548U-201ENST00000390728 81 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 SNORD90-201ENST00000391145 111 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 SNX3P1X-201ENST00000414887 175 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 snoU13.17-201ENST00000458802 104 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 RNU7-134P-201ENST00000458997 64 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 SNORD4B-201ENST00000459083 72 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 RNU6-479P-201ENST00000516348 105 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 MIR3165-201ENST00000579874 75 ntBASIC-1.28□□□□□ -2.61
LRRC28Q86X40 RNU6-151P-201ENST00000364158 107 ntBASIC-1.29□□□□□ -2.62
LRRC28Q86X40 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.29□□□□□ -2.62
LRRC28Q86X40 MIR568-201ENST00000385036 95 ntBASIC-1.29□□□□□ -2.62
LRRC28Q86X40 RNU6-62P-201ENST00000516526 102 ntBASIC-1.29□□□□□ -2.62
LRRC28Q86X40 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.29□□□□□ -2.62
LRRC28Q86X40 MIR4439-201ENST00000583746 80 ntBASIC-1.29□□□□□ -2.62
LRRC28Q86X40 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.3□□□□□ -2.62
LRRC28Q86X40 RNA5SP331-201ENST00000364986 107 ntBASIC-1.3□□□□□ -2.62
LRRC28Q86X40 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.3□□□□□ -2.62
LRRC28Q86X40 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.3□□□□□ -2.62
LRRC28Q86X40 RNU6-644P-201ENST00000391155 98 ntBASIC-1.3□□□□□ -2.62
LRRC28Q86X40 MIR8485-201ENST00000401372 91 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms