Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC011195.1-201ENST00000578177 177 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 MIR3134-201ENST00000579433 74 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 MIR3612-201ENST00000579753 87 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 MIR3920-201ENST00000581751 86 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 RNU6-1094P-201ENST00000362416 104 ntBASIC1.2□□□□□ -2.22
USP48Q86UV5 MIR664A-201ENST00000626086 82 ntBASIC1.2□□□□□ -2.22
USP48Q86UV5 AC244098.3-201ENST00000424803 96 ntBASIC1.19□□□□□ -2.22
USP48Q86UV5 RNU6-469P-201ENST00000516253 101 ntBASIC1.19□□□□□ -2.22
USP48Q86UV5 RNU6-135P-201ENST00000516769 101 ntBASIC1.19□□□□□ -2.22
USP48Q86UV5 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
USP48Q86UV5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USP48Q86UV5 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
USP48Q86UV5 SNORD77.2-201ENST00000391045 68 ntBASIC1.18□□□□□ -2.22
USP48Q86UV5 AC139453.2-201ENST00000487255 133 ntBASIC1.18□□□□□ -2.22
USP48Q86UV5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
USP48Q86UV5 RNU6-523P-201ENST00000516304 54 ntBASIC1.18□□□□□ -2.22
USP48Q86UV5 RNU6-208P-201ENST00000362431 107 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 RNU4-45P-201ENST00000365469 141 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 SNORD28-201ENST00000384706 75 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 MIR532-201ENST00000385025 91 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 RNU6-935P-201ENST00000410371 100 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
USP48Q86UV5 Y_RNA.660-201ENST00000516002 120 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.17□□□□□ -2.22
USP48Q86UV5 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
USP48Q86UV5 RNU6-1126P-201ENST00000384002 107 ntBASIC1.16□□□□□ -2.22
USP48Q86UV5 AC073261.1-201ENST00000429409 121 ntBASIC1.16□□□□□ -2.22
USP48Q86UV5 RNU6-330P-201ENST00000363015 107 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 SNORD18A-201ENST00000363753 72 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 Y_RNA.371-201ENST00000365591 113 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 MIR451A-201ENST00000385059 72 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 MIR2113-201ENST00000459007 91 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 RNU7-13P-201ENST00000516413 62 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 MIR3678-201ENST00000578455 94 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
USP48Q86UV5 Y_RNA.12-201ENST00000362393 112 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 SNORD115-44-201ENST00000365391 82 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 MIR608-201ENST00000384820 100 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 MIR193B-201ENST00000384907 83 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 AC074348.1-201ENST00000426503 132 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.14□□□□□ -2.23
USP48Q86UV5 RNU7-104P-201ENST00000459398 79 ntBASIC1.13□□□□□ -2.23
USP48Q86UV5 RNA5SP47-201ENST00000517230 109 ntBASIC1.13□□□□□ -2.23
USP48Q86UV5 MIR4714-201ENST00000580728 77 ntBASIC1.13□□□□□ -2.23
USP48Q86UV5 MIR4639-201ENST00000584938 69 ntBASIC1.13□□□□□ -2.23
USP48Q86UV5 MIR18A-201ENST00000362310 71 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 Y_RNA.264-201ENST00000364665 102 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
USP48Q86UV5 RNU6-70P-201ENST00000516438 60 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 MIR1273G-201ENST00000577677 100 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 YWHAEP2-201ENST00000580066 112 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 YWHAEP3-201ENST00000582767 121 ntBASIC1.12□□□□□ -2.23
USP48Q86UV5 RNU6-824P-201ENST00000363724 104 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 Y_RNA.545-201ENST00000384652 105 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 MIR519E-201ENST00000385075 84 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 SNORD41.1-201ENST00000391000 69 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 ACA64.5-201ENST00000516207 127 ntBASIC1.11□□□□□ -2.23
USP48Q86UV5 RNU6-340P-201ENST00000364005 107 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 Y_RNA.258-201ENST00000364613 105 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 RNU6-726P-201ENST00000364680 107 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 MIR617-201ENST00000385030 97 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 Y_RNA.606-201ENST00000410579 103 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 RNU6-1015P-201ENST00000517121 99 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 AC067863.3-201ENST00000624172 122 ntBASIC1.1□□□□□ -2.23
USP48Q86UV5 RNY4P3-201ENST00000365254 95 ntBASIC1.09□□□□□ -2.23
USP48Q86UV5 U3.27-201ENST00000391237 200 ntBASIC1.09□□□□□ -2.23
USP48Q86UV5 RNU6-380P-201ENST00000410207 107 ntBASIC1.09□□□□□ -2.23
USP48Q86UV5 RNU6-303P-201ENST00000517091 106 ntBASIC1.09□□□□□ -2.23
USP48Q86UV5 AL590095.2-201ENST00000604136 117 ntBASIC1.09□□□□□ -2.23
USP48Q86UV5 RNU5F-1-201ENST00000362507 117 ntBASIC1.08□□□□□ -2.24
USP48Q86UV5 Y_RNA.178-201ENST00000363832 102 ntBASIC1.08□□□□□ -2.24
USP48Q86UV5 AC093423.1-201ENST00000440817 142 ntBASIC1.08□□□□□ -2.24
USP48Q86UV5 AC097510.1-201ENST00000510945 133 ntBASIC1.08□□□□□ -2.24
USP48Q86UV5 SNORA36.1-201ENST00000363424 132 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 RNU6-411P-201ENST00000384451 107 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 RNU2-59P-201ENST00000410482 191 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 RNU6-687P-201ENST00000516443 89 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 RNU6-807P-201ENST00000516805 107 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 U6.81-201ENST00000612550 106 ntBASIC1.07□□□□□ -2.24
USP48Q86UV5 RNU6-154P-201ENST00000384306 106 ntBASIC1.06□□□□□ -2.24
USP48Q86UV5 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.06□□□□□ -2.24
USP48Q86UV5 MIR6513-201ENST00000621188 64 ntBASIC1.06□□□□□ -2.24
USP48Q86UV5 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
USP48Q86UV5 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 RNA5SP457-201ENST00000363657 124 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 SNORA8.1-201ENST00000384250 140 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 RNU6-1177P-201ENST00000391058 104 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.05□□□□□ -2.24
USP48Q86UV5 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.04□□□□□ -2.24
USP48Q86UV5 AC114801.3-201ENST00000510231 177 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 Y_RNA.681-201ENST00000516445 113 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 RNU6-1057P-201ENST00000517162 102 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms