Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC067940.1-201ENST00000458411 300 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 MIR548O2-201ENST00000616090 70 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 MIR8070-201ENST00000616510 88 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 MIR4773-1-201ENST00000637203 78 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 SNORA25-201ENST00000384384 134 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 SNORD116-24-201ENST00000384549 92 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 MIR519E-201ENST00000385075 84 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-274P-201ENST00000459566 107 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
LIMS2Q7Z4I7 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 SNORD41.1-201ENST00000391000 69 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 AC244098.3-201ENST00000424803 96 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-881P-201ENST00000516813 102 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 AL078603.1-201ENST00000603824 313 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 AL136317.1-201ENST00000612653 226 ntBASIC1.16□□□□□ -2.22
LIMS2Q7Z4I7 SNORD113.1-201ENST00000363280 73 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 MIR644A-201ENST00000385262 94 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 AC093423.1-201ENST00000440817 142 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 RNU7-104P-201ENST00000459398 79 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-135P-201ENST00000516769 101 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 MIR4639-201ENST00000584938 69 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 AC067863.3-201ENST00000624172 122 ntBASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
LIMS2Q7Z4I7 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-604P-201ENST00000390917 100 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-630P-201ENST00000391258 106 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-1216P-201ENST00000362590 107 ntBASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 RNA5SP117-201ENST00000365294 118 ntBASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-895P-201ENST00000384125 103 ntBASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 Y_RNA.443-201ENST00000384135 111 ntBASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 MIR499A-201ENST00000384903 122 ntBASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LIMS2Q7Z4I7 SNORA25.4-201ENST00000363666 124 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-1039P-201ENST00000383931 107 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 NAMPTP3-201ENST00000569273 224 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 AC244669.1-204ENST00000621564 178 ntBASIC1.12□□□□□ -2.23
LIMS2Q7Z4I7 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 AL691482.2-201ENST00000457453 84 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 RNA5SP47-201ENST00000517230 109 ntBASIC1.11□□□□□ -2.23
LIMS2Q7Z4I7 SNORD18A-201ENST00000363753 72 ntBASIC1.1□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-726P-201ENST00000364680 107 ntBASIC1.1□□□□□ -2.23
LIMS2Q7Z4I7 RNU6-54P-201ENST00000365563 107 ntBASIC1.1□□□□□ -2.23
LIMS2Q7Z4I7 SNORD42B-201ENST00000458893 67 ntBASIC1.1□□□□□ -2.23
LIMS2Q7Z4I7 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
LIMS2Q7Z4I7 MIR6504-201ENST00000613520 61 ntBASIC1.09□□□□□ -2.23
LIMS2Q7Z4I7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 MT-TY-201ENST00000387409 66 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 MIR4511-201ENST00000582784 87 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 MIR6509-201ENST00000614603 85 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 AC073869.9-201ENST00000641610 120 ntBASIC1.08□□□□□ -2.24
LIMS2Q7Z4I7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 RNU6V-201ENST00000384105 107 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-982P-201ENST00000516216 102 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 SNORA40.17-201ENST00000517256 115 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 MIR3678-201ENST00000578455 94 ntBASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LIMS2Q7Z4I7 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-260P-201ENST00000384092 107 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-469P-201ENST00000516253 101 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 MIR3657-201ENST00000584818 117 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 AC103706.3-201ENST00000636297 85 ntBASIC1.06□□□□□ -2.24
LIMS2Q7Z4I7 RNU1-141P-201ENST00000364623 158 ntBASIC1.05□□□□□ -2.24
LIMS2Q7Z4I7 snoU13.18-201ENST00000459483 104 ntBASIC1.05□□□□□ -2.24
LIMS2Q7Z4I7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.05□□□□□ -2.24
LIMS2Q7Z4I7 MIR3612-201ENST00000579753 87 ntBASIC1.05□□□□□ -2.24
LIMS2Q7Z4I7 MIR6828-201ENST00000636181 60 ntBASIC1.05□□□□□ -2.24
LIMS2Q7Z4I7 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 SNORA8.2-201ENST00000384372 139 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 MIR7-2-201ENST00000384970 110 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.04□□□□□ -2.24
LIMS2Q7Z4I7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-669P-201ENST00000365575 107 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 MIR203A-201ENST00000384836 110 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms