Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 AC006254.2-201ENST00000603259 279 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-309P-201ENST00000364573 106 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-937P-201ENST00000384325 106 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 snoU18.1-201ENST00000629629 71 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 MIR548A3-201ENST00000385297 97 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 MTND3P2-201ENST00000438452 342 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 MIR3170-201ENST00000582699 77 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.68□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 SNORD115-46-201ENST00000390982 71 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 RNA5SP106-201ENST00000517274 100 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 MIR3064-201ENST00000581130 66 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 AL050303.3-201ENST00000613704 284 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 RNU6-908P-201ENST00000410160 94 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.69□□□□□ -2.68
CSPG4Q6UVK1 RNU6-890P-201ENST00000384121 107 ntBASIC-1.7□□□□□ -2.68
CSPG4Q6UVK1 RNA5SP292-201ENST00000390974 118 ntBASIC-1.7□□□□□ -2.68
CSPG4Q6UVK1 AL445567.1-201ENST00000439121 144 ntBASIC-1.7□□□□□ -2.68
CSPG4Q6UVK1 AL118496.2-201ENST00000448300 230 ntBASIC-1.7□□□□□ -2.68
CSPG4Q6UVK1 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.7□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 SNORA24B-201ENST00000384176 131 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 SNORD116-1-201ENST00000384335 95 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 RNU6-415P-201ENST00000516252 97 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 MTND5P26-201ENST00000426018 1752 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 SNORD116-25-201ENST00000516517 92 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 AC093424.1-201ENST00000604999 338 ntBASIC-1.71□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 RNU6-662P-201ENST00000384253 104 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 RNU6-616P-201ENST00000384353 107 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 RNU6-106P-201ENST00000384405 107 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 MIR759-201ENST00000390224 91 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 RNU7-30P-201ENST00000516835 62 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 AC015540.1-201ENST00000615828 501 ntBASIC-1.72□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.72□□□□□ -2.69
CSPG4Q6UVK1 MIR520D-201ENST00000385002 87 ntBASIC-1.72□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.72□□□□□ -2.69
CSPG4Q6UVK1 AC090574.1-201ENST00000623186 233 ntBASIC-1.72□□□□□ -2.69
CSPG4Q6UVK1 SNORD18C-201ENST00000362704 69 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 MIR548P-201ENST00000408336 84 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 RN7SKP298-201ENST00000515950 94 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 SNORA40.14-201ENST00000516543 86 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 RNU6-699P-201ENST00000517081 110 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 SNORD113-8-201ENST00000363497 74 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 RNU6-101P-201ENST00000410323 104 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.73□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 RNU6-290P-201ENST00000365212 101 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 MTND4P17-201ENST00000470444 350 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 RNU7-6P-201ENST00000516845 62 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 AC109635.3-201ENST00000529536 185 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 RNU6-508P-201ENST00000363231 103 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 MIR509-1-201ENST00000385265 94 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 MIR509-2-201ENST00000390724 91 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 MTND3P22-201ENST00000510932 243 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.74□□□□□ -2.69
CSPG4Q6UVK1 MIR379-201ENST00000362218 67 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 RNU6-643P-201ENST00000384018 107 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 AL132765.2-201ENST00000610812 351 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 U6.97-201ENST00000636904 101 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 SNORD2.1-201ENST00000458762 69 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 SNORD4B-201ENST00000459083 72 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 AC113139.1-201ENST00000605049 239 ntBASIC-1.75□□□□□ -2.69
CSPG4Q6UVK1 AC097484.2-201ENST00000509147 251 ntBASIC-1.76□□□□□ -2.69
CSPG4Q6UVK1 MIR3163-201ENST00000581592 73 ntBASIC-1.76□□□□□ -2.69
CSPG4Q6UVK1 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 RNU1-115P-201ENST00000365329 160 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 SNORA63.7-201ENST00000365579 123 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.77□□□□□ -2.69
CSPG4Q6UVK1 SNORD11.1-201ENST00000459482 85 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms