Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 FGF7P7-201ENST00000514120 227 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 RNU6-65P-201ENST00000516332 98 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 MIR5009-201ENST00000578736 100 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 AC103810.7-201ENST00000607821 91 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 MIR3914-2-201ENST00000637339 95 ntBASIC-0.35□□□□□ -2.47
SMARCD3Q6STE5 RNY1P5-201ENST00000383890 115 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 MIR196A2-201ENST00000385189 110 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 MIR548E-201ENST00000408287 88 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 AL445193.1-201ENST00000441183 141 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 RNU6-794P-201ENST00000517261 64 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 MIR3140-201ENST00000583685 90 ntBASIC-0.36□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 MIR216B-201ENST00000390186 82 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 snoU13.13-201ENST00000458842 104 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 SNORD126-201ENST00000459475 77 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 AC114755.3-201ENST00000481111 251 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 RNU6-795P-201ENST00000516323 103 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 RNU6-659P-201ENST00000516454 104 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 MIR6759-201ENST00000638110 65 ntBASIC-0.37□□□□□ -2.47
SMARCD3Q6STE5 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 RNU6-80P-201ENST00000384195 107 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 SNORD56B-201ENST00000384713 71 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 MIR548A3-201ENST00000385297 97 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 SNORA19.1-201ENST00000410656 129 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 IGLVI-20-201ENST00000519296 130 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 MIR4802-201ENST00000581881 80 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 MIR4777-201ENST00000583710 86 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 AC012531.4-201ENST00000616509 177 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 uc_338.36-201ENST00000622331 158 ntBASIC-0.38□□□□□ -2.47
SMARCD3Q6STE5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 SNORD45B-201ENST00000364617 72 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 RNU6-813P-201ENST00000384691 107 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 SNORD90-201ENST00000391145 111 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 RNU6-644P-201ENST00000391155 98 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 U3.27-201ENST00000391237 200 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 AC096531.1-201ENST00000419107 107 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 SNORD4B-201ENST00000459083 72 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 MIR4432-201ENST00000581823 84 ntBASIC-0.39□□□□□ -2.47
SMARCD3Q6STE5 RNU6-774P-201ENST00000363238 107 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 RNA5SP292-201ENST00000390974 118 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 MIR3064-201ENST00000581130 66 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 MIR4280-201ENST00000582178 76 ntBASIC-0.4□□□□□ -2.47
SMARCD3Q6STE5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.41□□□□□ -2.48
SMARCD3Q6STE5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.41□□□□□ -2.48
SMARCD3Q6STE5 SNORD38.3-201ENST00000516599 73 ntBASIC-0.41□□□□□ -2.48
SMARCD3Q6STE5 MIR3133-201ENST00000583157 78 ntBASIC-0.41□□□□□ -2.48
SMARCD3Q6STE5 MIR4439-201ENST00000583746 80 ntBASIC-0.41□□□□□ -2.48
SMARCD3Q6STE5 SNORA63.2-201ENST00000362603 126 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 RNU6-476P-201ENST00000384726 107 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 AC104996.3-201ENST00000590718 94 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 U6.95-201ENST00000636931 70 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 AC093726.3-201ENST00000637588 150 ntBASIC-0.42□□□□□ -2.48
SMARCD3Q6STE5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 SNORA24B-201ENST00000384176 131 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 MIR5704-201ENST00000584029 77 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
SMARCD3Q6STE5 RNU6-495P-201ENST00000362995 107 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU4-36P-201ENST00000364294 144 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD116-14-201ENST00000383894 92 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD116-17-201ENST00000383929 92 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU6-209P-201ENST00000384118 107 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD116-15-201ENST00000384445 92 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD116-19-201ENST00000384729 92 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 MIR548U-201ENST00000390728 81 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 MIR548I1-201ENST00000408810 149 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 RNU6-519P-201ENST00000410590 108 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORA18.5-201ENST00000516616 101 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 MIR4645-201ENST00000583158 77 ntBASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.44□□□□□ -2.48
SMARCD3Q6STE5 SNORD116-21-201ENST00000384507 92 ntBASIC-0.45□□□□□ -2.48
SMARCD3Q6STE5 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
SMARCD3Q6STE5 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.45□□□□□ -2.48
SMARCD3Q6STE5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms