Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
E4F1Q66K89 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
E4F1Q66K89 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
E4F1Q66K89 RNU6-857P-201ENST00000515893 110 ntBASIC0.85□□□□□ -2.27
E4F1Q66K89 Y_RNA.660-201ENST00000516002 120 ntBASIC0.85□□□□□ -2.27
E4F1Q66K89 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.85□□□□□ -2.27
E4F1Q66K89 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 RNU6-686P-201ENST00000364839 107 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 RNU6-24P-201ENST00000384440 107 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 MIR216B-201ENST00000390186 82 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
E4F1Q66K89 RNU6-315P-201ENST00000362666 107 ntBASIC0.83□□□□□ -2.28
E4F1Q66K89 Y_RNA.264-201ENST00000364665 102 ntBASIC0.83□□□□□ -2.28
E4F1Q66K89 Y_RNA.371-201ENST00000365591 113 ntBASIC0.83□□□□□ -2.28
E4F1Q66K89 RNA5SP102-201ENST00000516865 106 ntBASIC0.83□□□□□ -2.28
E4F1Q66K89 MIRLET7A1-201ENST00000362295 80 ntBASIC0.82□□□□□ -2.28
E4F1Q66K89 RNU6-380P-201ENST00000410207 107 ntBASIC0.82□□□□□ -2.28
E4F1Q66K89 RNA5SP484-201ENST00000458857 111 ntBASIC0.82□□□□□ -2.28
E4F1Q66K89 MIR4460-201ENST00000577862 86 ntBASIC0.82□□□□□ -2.28
E4F1Q66K89 AL162376.1-201ENST00000624117 175 ntBASIC0.82□□□□□ -2.28
E4F1Q66K89 Y_RNA.12-201ENST00000362393 112 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 Y_RNA.244-201ENST00000364484 109 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 SNORA24B-201ENST00000384176 131 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
E4F1Q66K89 RNU6-1177P-201ENST00000391058 104 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 AL078603.1-201ENST00000603824 313 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 MIR8070-201ENST00000616510 88 ntBASIC0.81□□□□□ -2.28
E4F1Q66K89 RNU6-1094P-201ENST00000362416 104 ntBASIC0.8□□□□□ -2.28
E4F1Q66K89 RNU1-141P-201ENST00000364623 158 ntBASIC0.8□□□□□ -2.28
E4F1Q66K89 SNORD71-201ENST00000411292 86 ntBASIC0.8□□□□□ -2.28
E4F1Q66K89 NAMPTP3-201ENST00000569273 224 ntBASIC0.8□□□□□ -2.28
E4F1Q66K89 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
E4F1Q66K89 RNU6V-201ENST00000384105 107 ntBASIC0.79□□□□□ -2.28
E4F1Q66K89 SNORA40.8-201ENST00000411034 126 ntBASIC0.79□□□□□ -2.28
E4F1Q66K89 AC097510.1-201ENST00000510945 133 ntBASIC0.79□□□□□ -2.28
E4F1Q66K89 MIR4752-201ENST00000579672 72 ntBASIC0.79□□□□□ -2.28
E4F1Q66K89 MIR548O2-201ENST00000616090 70 ntBASIC0.79□□□□□ -2.28
E4F1Q66K89 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
E4F1Q66K89 MIR1276-201ENST00000408707 83 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 AC093423.1-201ENST00000440817 142 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 YWHAEP2-201ENST00000580066 112 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 YWHAEP3-201ENST00000582767 121 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 AC073869.9-201ENST00000641610 120 ntBASIC0.78□□□□□ -2.28
E4F1Q66K89 RNU6-824P-201ENST00000363724 104 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 RNU6-54P-201ENST00000365563 107 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 AC006210.1-201ENST00000424882 111 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 MIR4773-1-201ENST00000637203 78 ntBASIC0.77□□□□□ -2.29
E4F1Q66K89 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
E4F1Q66K89 MT-TY-201ENST00000387409 66 ntBASIC0.76□□□□□ -2.29
E4F1Q66K89 RNU2-59P-201ENST00000410482 191 ntBASIC0.76□□□□□ -2.29
E4F1Q66K89 RNU5B-6P-201ENST00000516765 68 ntBASIC0.76□□□□□ -2.29
E4F1Q66K89 MIR4484-201ENST00000582855 83 ntBASIC0.76□□□□□ -2.29
E4F1Q66K89 SNORD118-201ENST00000363593 134 ntBASIC0.75□□□□□ -2.29
E4F1Q66K89 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.75□□□□□ -2.29
E4F1Q66K89 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
E4F1Q66K89 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
E4F1Q66K89 MIR4662A-201ENST00000637499 67 ntBASIC0.75□□□□□ -2.29
E4F1Q66K89 RNU6-340P-201ENST00000364005 107 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 Y_RNA.258-201ENST00000364613 105 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 MIR499A-201ENST00000384903 122 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 SNORD110-201ENST00000408189 75 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 Y_RNA.606-201ENST00000410579 103 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.74□□□□□ -2.29
E4F1Q66K89 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
E4F1Q66K89 RNU6-681P-201ENST00000364012 104 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 RNU1-93P-201ENST00000364704 169 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 RNU6-382P-201ENST00000365181 106 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 RNU6-945P-201ENST00000383947 107 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 RNU6-807P-201ENST00000516805 107 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 RNU6-303P-201ENST00000517091 106 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 U6.81-201ENST00000612550 106 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 SNORA70.25-201ENST00000612741 95 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 U7.4-201ENST00000614961 63 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 AC069503.3-201ENST00000618674 145 ntBASIC0.73□□□□□ -2.29
E4F1Q66K89 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
E4F1Q66K89 Y_RNA.532-201ENST00000384590 113 ntBASIC0.72□□□□□ -2.29
E4F1Q66K89 RNU6-274P-201ENST00000459566 107 ntBASIC0.72□□□□□ -2.29
E4F1Q66K89 RNU6-776P-201ENST00000364403 104 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 RNU6-1022P-201ENST00000365049 104 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 AC074348.1-201ENST00000426503 132 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 MIR4473-201ENST00000583731 91 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 AC145423.2-201ENST00000610631 239 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 MIR1297-201ENST00000637311 77 ntBASIC0.71□□□□□ -2.3
E4F1Q66K89 SNORD75.2-201ENST00000408784 58 ntBASIC0.7□□□□□ -2.3
E4F1Q66K89 SCARNA18B-201ENST00000458806 135 ntBASIC0.7□□□□□ -2.3
E4F1Q66K89 RNU6-495P-201ENST00000362995 107 ntBASIC0.69□□□□□ -2.3
E4F1Q66K89 MIR1287-201ENST00000408492 90 ntBASIC0.69□□□□□ -2.3
E4F1Q66K89 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
E4F1Q66K89 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
E4F1Q66K89 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.69□□□□□ -2.3
E4F1Q66K89 Y_RNA.226-201ENST00000364337 114 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms