Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 RNU1-42P-201ENST00000364033 160 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 SNORD12-201ENST00000391002 90 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR1827-201ENST00000408549 66 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 SNORD75.2-201ENST00000408784 58 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR548AG2-201ENST00000581228 64 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 AC069503.3-201ENST00000618674 145 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR633-201ENST00000384821 98 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AL691482.2-201ENST00000457453 84 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 AC079150.2-201ENST00000443733 78 ntBASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 uc_338.16-201ENST00000621804 95 ntBASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-495P-201ENST00000362995 107 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-1126P-201ENST00000384002 107 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 MIR548J-201ENST00000408833 112 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AC002429.1-201ENST00000437672 148 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU7-24P-201ENST00000458867 62 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU1-92P-201ENST00000517017 135 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 MIR6078-201ENST00000611069 100 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AL353770.2-201ENST00000620024 78 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNA5SP403-201ENST00000363598 108 ntBASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-141P-201ENST00000410499 105 ntBASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 RNA5SP117-201ENST00000365294 118 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-1039P-201ENST00000383931 107 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 MIR216A-201ENST00000385063 110 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 RNU7-104P-201ENST00000459398 79 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 NAMPTP3-201ENST00000569273 224 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 MIR3920-201ENST00000581751 86 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNU7-161P-201ENST00000517289 62 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 AL136317.1-201ENST00000612653 226 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 SNORA25-201ENST00000384384 134 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 SNORD89-201ENST00000390981 114 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 MIR6509-201ENST00000614603 85 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 MIR203A-201ENST00000384836 110 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP436-201ENST00000516020 115 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-614P-201ENST00000384369 107 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 U6.59-201ENST00000615686 107 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 MIR548O2-201ENST00000616090 70 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP327-201ENST00000362494 101 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-668P-201ENST00000364180 107 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 MIR617-201ENST00000385030 97 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 AL354695.1-201ENST00000427935 228 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 MTND4LP1-201ENST00000446263 157 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-469P-201ENST00000516253 101 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 AC073869.9-201ENST00000641610 120 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-54P-201ENST00000365563 107 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 Y_RNA.375-201ENST00000365625 101 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 MIR216B-201ENST00000390186 82 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 AC092634.7-201ENST00000621022 103 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PRPF38BQ5VTL8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 MIR519E-201ENST00000385075 84 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 MIR644A-201ENST00000385262 94 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 AC002350.1-201ENST00000490759 375 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-542P-201ENST00000516405 103 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 AC067863.3-201ENST00000624172 122 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 Y_RNA.115-201ENST00000363272 98 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-829P-201ENST00000363700 112 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 FABP5P4-201ENST00000437203 171 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 MIR3657-201ENST00000584818 117 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 AL627230.5-201ENST00000619807 58 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 RNA5SP62-201ENST00000363457 110 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 SNORD42B-201ENST00000458893 67 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-645P-201ENST00000364649 106 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR193B-201ENST00000384907 83 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 SNORD105-201ENST00000386910 85 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR548L-201ENST00000408303 86 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-135P-201ENST00000516769 101 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR1273G-201ENST00000577677 100 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PRPF38BQ5VTL8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF38BQ5VTL8 AC098934.3-201ENST00000430450 190 ntBASIC1.78□□□□□ -2.12
PRPF38BQ5VTL8 SNORA40.17-201ENST00000517256 115 ntBASIC1.78□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-1079P-201ENST00000362861 110 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 SNORA25.5-201ENST00000363782 126 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNA5SP192-201ENST00000364404 120 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 Y_RNA.236-201ENST00000364427 111 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNU6-260P-201ENST00000384092 107 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNU6V-201ENST00000384105 107 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 U7.7-201ENST00000459276 60 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms