Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.6□□□□□ -2.99
CCDC58Q4VC31 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.6□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.6□□□□□ -2.99
CCDC58Q4VC31 U6.106-201ENST00000636360 105 ntBASIC-3.6□□□□□ -2.99
CCDC58Q4VC31 RNU6-310P-201ENST00000384655 107 ntBASIC-3.61□□□□□ -2.99
CCDC58Q4VC31 RNU6-259P-201ENST00000383999 107 ntBASIC-3.62□□□□□ -2.99
CCDC58Q4VC31 AL691482.2-201ENST00000457453 84 ntBASIC-3.62□□□□□ -2.99
CCDC58Q4VC31 MIR3064-201ENST00000581130 66 ntBASIC-3.62□□□□□ -2.99
CCDC58Q4VC31 MIR3170-201ENST00000582699 77 ntBASIC-3.62□□□□□ -2.99
CCDC58Q4VC31 SNORA25.1-201ENST00000362326 128 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-1313P-201ENST00000362622 102 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-598P-201ENST00000364017 105 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-211P-201ENST00000384047 107 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 SNORD90-201ENST00000391145 111 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.602-201ENST00000410535 92 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 MTND3P2-201ENST00000438452 342 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 AC005520.4-201ENST00000604337 90 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 U2.7-201ENST00000619197 100 ntBASIC-3.63□□□□□ -2.99
CCDC58Q4VC31 RNU6-694P-201ENST00000364071 147 ntBASIC-3.64□□□□□ -2.99
CCDC58Q4VC31 SNORD50.2-201ENST00000365465 70 ntBASIC-3.64□□□□□ -2.99
CCDC58Q4VC31 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.64□□□□□ -2.99
CCDC58Q4VC31 RNU6-807P-201ENST00000516805 107 ntBASIC-3.64□□□□□ -2.99
CCDC58Q4VC31 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.65□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.64-201ENST00000362845 102 ntBASIC-3.65□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.65□□□□□ -2.99
CCDC58Q4VC31 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-3.65□□□□□ -2.99
CCDC58Q4VC31 AL512310.12-203ENST00000640543 90 ntBASIC-3.65□□□□□ -2.99
CCDC58Q4VC31 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 RNU6-151P-201ENST00000364158 107 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 MIR548U-201ENST00000390728 81 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 AC109635.3-201ENST00000529536 185 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 AC025521.1-201ENST00000621624 286 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 MIR1255B1-201ENST00000636325 63 ntBASIC-3.66□□□□□ -3
CCDC58Q4VC31 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.67□□□□□ -3
CCDC58Q4VC31 RNU6-510P-201ENST00000391239 108 ntBASIC-3.67□□□□□ -3
CCDC58Q4VC31 RNU6-1109P-201ENST00000391187 107 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 SNORA7.5-201ENST00000410672 110 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 RNU6-130P-201ENST00000411112 103 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 RNU7-6P-201ENST00000516845 62 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 AC104996.3-201ENST00000590718 94 ntBASIC-3.68□□□□□ -3
CCDC58Q4VC31 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 Y_RNA.394-201ENST00000383942 103 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 U2.18-201ENST00000622185 84 ntBASIC-3.69□□□□□ -3
CCDC58Q4VC31 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.7□□□□□ -3
CCDC58Q4VC31 RNY4-201ENST00000516507 96 ntBASIC-3.7□□□□□ -3
CCDC58Q4VC31 AC037487.3-201ENST00000606668 112 ntBASIC-3.7□□□□□ -3
CCDC58Q4VC31 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.7□□□□□ -3
CCDC58Q4VC31 MIR376A1-201ENST00000616574 68 ntBASIC-3.7□□□□□ -3
CCDC58Q4VC31 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.71□□□□□ -3
CCDC58Q4VC31 MIR559-201ENST00000385188 96 ntBASIC-3.71□□□□□ -3
CCDC58Q4VC31 SNORD18C-201ENST00000362704 69 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNU6-290P-201ENST00000365212 101 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNU6-326P-201ENST00000365480 107 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 DEFB108C-201ENST00000400154 252 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNU6-1046P-201ENST00000516538 107 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNY4P20-201ENST00000516678 93 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 RNU6-656P-201ENST00000516785 107 ntBASIC-3.72□□□□□ -3
CCDC58Q4VC31 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.73□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.541-201ENST00000384640 113 ntBASIC-3.73□□□□□ -3.01
CCDC58Q4VC31 SNORA40.14-201ENST00000516543 86 ntBASIC-3.73□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.74□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.74□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.74□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.74□□□□□ -3.01
CCDC58Q4VC31 AC012531.4-201ENST00000616509 177 ntBASIC-3.74□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.75□□□□□ -3.01
CCDC58Q4VC31 RNU6-1119P-201ENST00000384349 108 ntBASIC-3.75□□□□□ -3.01
CCDC58Q4VC31 MIR759-201ENST00000390224 91 ntBASIC-3.75□□□□□ -3.01
CCDC58Q4VC31 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.75□□□□□ -3.01
CCDC58Q4VC31 RNU6-699P-201ENST00000517081 110 ntBASIC-3.75□□□□□ -3.01
CCDC58Q4VC31 RNU6-995P-201ENST00000391244 107 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 RNU6-381P-201ENST00000391259 108 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 RNU4-14P-201ENST00000410858 122 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 MIR5690-201ENST00000583739 73 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.76□□□□□ -3.01
CCDC58Q4VC31 RNU6-247P-201ENST00000362636 107 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 SNORD113-3-201ENST00000364830 72 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 MIR548A3-201ENST00000385297 97 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 MT-TI-201ENST00000387365 69 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 RNA5SP292-201ENST00000390974 118 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 SNORA20.3-201ENST00000516880 132 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 AC093424.1-201ENST00000604999 338 ntBASIC-3.77□□□□□ -3.01
CCDC58Q4VC31 MIR429-201ENST00000362106 83 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 SNORD81.2-201ENST00000365153 76 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 AL121914.1-201ENST00000450188 156 ntBASIC-3.78□□□□□ -3.01
CCDC58Q4VC31 U6.81-201ENST00000612550 106 ntBASIC-3.78□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 444.6 ms