Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 RNU6-995P-201ENST00000391244 107 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 RNU6-976P-201ENST00000516086 111 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 MIR4744-201ENST00000581563 82 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 AL162413.1-201ENST00000603198 110 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 SNORA27.2-201ENST00000363365 126 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 RNU6-519P-201ENST00000410590 108 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 RNU6-835P-201ENST00000516974 104 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 MIR3170-201ENST00000582699 77 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AC119751.7-201ENST00000600494 245 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AC093424.1-201ENST00000604999 338 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AL157392.4-201ENST00000609756 345 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-766P-201ENST00000362478 107 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-238P-201ENST00000363313 106 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-132P-201ENST00000383863 107 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 SNORA24B-201ENST00000384176 131 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-120P-201ENST00000516077 103 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-311P-201ENST00000516224 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AL137067.1-201ENST00000615933 120 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 U2.1-201ENST00000618978 145 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AL445567.1-201ENST00000439121 144 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AL121914.1-201ENST00000450188 156 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-232P-201ENST00000517144 64 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 MIR3149-201ENST00000584629 83 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 AC025521.1-201ENST00000621624 286 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-103P-201ENST00000363686 107 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-309P-201ENST00000364573 106 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 MT-TW-201ENST00000387382 68 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 MIR4272-201ENST00000635924 64 ntBASIC-1.05□□□□□ -2.58
HSPG2P98160 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 MTND4LP1-201ENST00000446263 157 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 MTND3P10-201ENST00000450967 341 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 SNORD11.1-201ENST00000459482 85 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU6-363P-201ENST00000362895 105 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU6-908P-201ENST00000410160 94 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU6-561P-201ENST00000516222 102 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 RNU7-169P-201ENST00000459456 61 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 AC015540.1-201ENST00000615828 501 ntBASIC-1.06□□□□□ -2.58
HSPG2P98160 SNORA25.1-201ENST00000362326 128 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU1-115P-201ENST00000365329 160 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-409P-201ENST00000384114 104 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU7-125P-201ENST00000458760 62 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 AC138305.3-201ENST00000624988 240 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 MIR429-201ENST00000362106 83 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-247P-201ENST00000362636 107 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 MIR513B-201ENST00000385136 84 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 MT-TI-201ENST00000387365 69 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-656P-201ENST00000516785 107 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 U2.18-201ENST00000622185 84 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.07□□□□□ -2.58
HSPG2P98160 RNU6-937P-201ENST00000384325 106 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 RNU6-752P-201ENST00000516376 102 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 RNY4P20-201ENST00000516678 93 ntBASIC-1.08□□□□□ -2.58
HSPG2P98160 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.08□□□□□ -2.58
HSPG2P98160 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms