Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR520D-201ENST00000385002 87 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 RNU7-169P-201ENST00000459456 61 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 snoU18.1-201ENST00000629629 71 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 RNU4-90P-201ENST00000362773 141 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 MIR514A2-201ENST00000385131 88 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 MIR514A3-201ENST00000385132 88 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 MTND5P5-201ENST00000503764 376 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 U2.18-201ENST00000622185 84 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 U6.97-201ENST00000636904 101 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 RNU6-248P-201ENST00000410720 107 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 MTCO2P19-201ENST00000427513 598 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 MIR1321-201ENST00000637766 79 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 MIR4744-201ENST00000581563 82 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-616P-201ENST00000384353 107 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 MIR548AA1-201ENST00000384971 97 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-800P-201ENST00000384473 103 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-507P-201ENST00000516045 100 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 AL157392.4-201ENST00000609756 345 ntBASIC-1.81□□□□□ -2.7
PRKDCP78527 RNU6-478P-201ENST00000363904 110 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 RNY1P1-201ENST00000364372 112 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 RNU6-132P-201ENST00000383863 107 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 RNU7-123P-201ENST00000515911 60 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 AC119751.7-201ENST00000600494 245 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 RNU1-115P-201ENST00000365329 160 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 MIR4528-201ENST00000577763 90 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 AC025521.1-201ENST00000621624 286 ntBASIC-1.82□□□□□ -2.7
PRKDCP78527 MTND5P26-201ENST00000426018 1752 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNA5SP292-201ENST00000390974 118 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU7-85P-201ENST00000458851 63 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-521P-201ENST00000516663 105 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 AC015540.1-201ENST00000615828 501 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-682P-201ENST00000363843 106 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 AC104996.3-201ENST00000590718 94 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-766P-201ENST00000362478 107 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 SNORD18C-201ENST00000362704 69 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-912P-201ENST00000363800 104 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.83□□□□□ -2.7
PRKDCP78527 RNU6-340P-201ENST00000364005 107 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 SNORA26.8-201ENST00000391306 124 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 MIR3163-201ENST00000581592 73 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 AL137067.1-201ENST00000615933 120 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNU6-752P-201ENST00000516376 102 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNU6-238P-201ENST00000363313 106 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 SNORA63.7-201ENST00000365579 123 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNY4P13-201ENST00000384284 96 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNU6-240P-201ENST00000516098 97 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.84□□□□□ -2.7
PRKDCP78527 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.85□□□□□ -2.7
PRKDCP78527 SNORD2.1-201ENST00000458762 69 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 MIR3064-201ENST00000581130 66 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 SNORA27.2-201ENST00000363365 126 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 SNORA25.1-201ENST00000362326 128 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 RNU6-309P-201ENST00000364573 106 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 RNY4P18-201ENST00000391107 89 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 U2.7-201ENST00000619197 100 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.85□□□□□ -2.71
PRKDCP78527 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 MIR616-201ENST00000385293 97 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 AL513043.2-201ENST00000573941 143 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 RNU6-971P-201ENST00000516920 106 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 RNU6-363P-201ENST00000362895 105 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 RNU6-232P-201ENST00000517144 64 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 AL162413.1-201ENST00000603198 110 ntBASIC-1.86□□□□□ -2.71
PRKDCP78527 SNORD50.2-201ENST00000365465 70 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 MTND3P2-201ENST00000438452 342 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 RNU6-409P-201ENST00000384114 104 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 MT-TW-201ENST00000387382 68 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms