Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC140658.3-201ENST00000567603 271 ntBASIC-1.26□□□□□ -2.61
EIF3EP60228 MIR6773-201ENST00000612812 74 ntBASIC-1.26□□□□□ -2.61
EIF3EP60228 AP001340.1-201ENST00000624405 217 ntBASIC-1.26□□□□□ -2.61
EIF3EP60228 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.27□□□□□ -2.61
EIF3EP60228 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.27□□□□□ -2.61
EIF3EP60228 RNY4P6-201ENST00000363667 96 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 RNU6-816P-201ENST00000390914 107 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 RNU6-274P-201ENST00000459566 107 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 RNU6-781P-201ENST00000516377 101 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 MIR548AX-201ENST00000580117 73 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 AC025521.1-201ENST00000621624 286 ntBASIC-1.28□□□□□ -2.61
EIF3EP60228 SNORA63-201ENST00000363450 132 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 RNU6-151P-201ENST00000364158 107 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 RNY4P3-201ENST00000365254 95 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 MIRLET7B-201ENST00000385140 83 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 RNU6-337P-201ENST00000391243 106 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 AL158147.1-201ENST00000443970 75 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 RNA5SP395-201ENST00000516567 118 ntBASIC-1.29□□□□□ -2.62
EIF3EP60228 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.3□□□□□ -2.62
EIF3EP60228 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.3□□□□□ -2.62
EIF3EP60228 SNORD50.2-201ENST00000365465 70 ntBASIC-1.3□□□□□ -2.62
EIF3EP60228 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.3□□□□□ -2.62
EIF3EP60228 RNU6-65P-201ENST00000516332 98 ntBASIC-1.3□□□□□ -2.62
EIF3EP60228 SNORA63.6-201ENST00000364921 119 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 RNU6-719P-201ENST00000516671 104 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 RNU6-861P-201ENST00000516745 106 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 MIR4536-1-201ENST00000583537 88 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 snoR1.1-201ENST00000628177 80 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 MIR6086-201ENST00000638065 55 ntBASIC-1.31□□□□□ -2.62
EIF3EP60228 RNU6-682P-201ENST00000363843 106 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 SNORD114-15-201ENST00000364687 72 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 MIR513C-201ENST00000401352 84 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 RNU7-85P-201ENST00000458851 63 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 RNU7-120P-201ENST00000459334 63 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 SNORD18.2-201ENST00000459604 70 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 FGF7P7-201ENST00000514120 227 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.32□□□□□ -2.62
EIF3EP60228 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.33□□□□□ -2.62
EIF3EP60228 MIR577-201ENST00000385196 96 ntBASIC-1.33□□□□□ -2.62
EIF3EP60228 RNY1P9-201ENST00000532431 109 ntBASIC-1.33□□□□□ -2.62
EIF3EP60228 MIR378F-201ENST00000578143 78 ntBASIC-1.33□□□□□ -2.62
EIF3EP60228 RNU6-495P-201ENST00000362995 107 ntBASIC-1.34□□□□□ -2.62
EIF3EP60228 AL118496.2-201ENST00000448300 230 ntBASIC-1.34□□□□□ -2.62
EIF3EP60228 SNORA63.2-201ENST00000362603 126 ntBASIC-1.35□□□□□ -2.63
EIF3EP60228 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.35□□□□□ -2.63
EIF3EP60228 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.35□□□□□ -2.63
EIF3EP60228 RNA5SP470-201ENST00000516463 106 ntBASIC-1.35□□□□□ -2.63
EIF3EP60228 SNORD114-17-201ENST00000364699 75 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 RNU6-132P-201ENST00000383863 107 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 AL513043.2-201ENST00000573941 143 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 MIR4694-201ENST00000578534 80 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.36□□□□□ -2.63
EIF3EP60228 U7.2-201ENST00000607576 63 ntBASIC-1.36□□□□□ -2.63
EIF3EP60228 AC025166.1-201ENST00000612411 163 ntBASIC-1.37□□□□□ -2.63
EIF3EP60228 SNORA62.4-201ENST00000365504 151 ntBASIC-1.38□□□□□ -2.63
EIF3EP60228 MIR124-2-201ENST00000385081 109 ntBASIC-1.38□□□□□ -2.63
EIF3EP60228 snoU83B.1-201ENST00000517136 88 ntBASIC-1.38□□□□□ -2.63
EIF3EP60228 MIR4503-201ENST00000582187 83 ntBASIC-1.38□□□□□ -2.63
EIF3EP60228 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.38□□□□□ -2.63
EIF3EP60228 MIR4306-201ENST00000583390 91 ntBASIC-1.38□□□□□ -2.63
EIF3EP60228 SNORD58C-201ENST00000365223 64 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 SNORA24B-201ENST00000384176 131 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
EIF3EP60228 MIR548X2-201ENST00000579776 100 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 MIR4464-201ENST00000580818 92 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 YWHAEP3-201ENST00000582767 121 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 MIR3140-201ENST00000583685 90 ntBASIC-1.39□□□□□ -2.63
EIF3EP60228 RNU6-832P-201ENST00000363319 107 ntBASIC-1.4□□□□□ -2.63
EIF3EP60228 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
EIF3EP60228 RNU6-30P-201ENST00000384561 107 ntBASIC-1.4□□□□□ -2.63
EIF3EP60228 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.4□□□□□ -2.63
EIF3EP60228 RNU6-327P-201ENST00000516270 127 ntBASIC-1.4□□□□□ -2.63
EIF3EP60228 SNORD116-18-201ENST00000383961 92 ntBASIC-1.41□□□□□ -2.64
EIF3EP60228 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.41□□□□□ -2.64
EIF3EP60228 MIR548U-201ENST00000390728 81 ntBASIC-1.41□□□□□ -2.64
EIF3EP60228 RNU7-24P-201ENST00000458867 62 ntBASIC-1.41□□□□□ -2.64
EIF3EP60228 MIR3064-201ENST00000581130 66 ntBASIC-1.41□□□□□ -2.64
EIF3EP60228 RNU6-990P-201ENST00000364385 104 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 RNU6-394P-201ENST00000410735 107 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 snoU13.19-201ENST00000459148 104 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 MIR4439-201ENST00000583746 80 ntBASIC-1.42□□□□□ -2.64
EIF3EP60228 RNY3P2-201ENST00000362918 102 ntBASIC-1.43□□□□□ -2.64
EIF3EP60228 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.43□□□□□ -2.64
EIF3EP60228 SNORD75.2-201ENST00000408784 58 ntBASIC-1.43□□□□□ -2.64
EIF3EP60228 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.43□□□□□ -2.64
EIF3EP60228 AC068339.1-201ENST00000526965 141 ntBASIC-1.43□□□□□ -2.64
EIF3EP60228 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.44□□□□□ -2.64
EIF3EP60228 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.44□□□□□ -2.64
EIF3EP60228 AC021146.9-201ENST00000512503 156 ntBASIC-1.44□□□□□ -2.64
EIF3EP60228 MIR4679-2-201ENST00000578358 77 ntBASIC-1.44□□□□□ -2.64
EIF3EP60228 MIR3613-201ENST00000579844 87 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms