Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU6-985P-201ENST00000410182 104 ntBASIC-1.16□□□□□ -2.6
CLDN6P56747 RNU6-168P-201ENST00000516189 101 ntBASIC-1.16□□□□□ -2.6
CLDN6P56747 MIR4308-201ENST00000580634 81 ntBASIC-1.16□□□□□ -2.6
CLDN6P56747 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.16□□□□□ -2.6
CLDN6P56747 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.17□□□□□ -2.6
CLDN6P56747 AL161932.1-201ENST00000437408 146 ntBASIC-1.17□□□□□ -2.6
CLDN6P56747 AC090616.4-201ENST00000448026 115 ntBASIC-1.17□□□□□ -2.6
CLDN6P56747 RNY4P20-201ENST00000516678 93 ntBASIC-1.17□□□□□ -2.6
CLDN6P56747 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 MT-TW-201ENST00000387382 68 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 MIR548E-201ENST00000408287 88 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 RNU4-88P-201ENST00000411220 86 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 SNORD54-201ENST00000459159 67 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 U6.106-201ENST00000636360 105 ntBASIC-1.18□□□□□ -2.6
CLDN6P56747 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 RNU6-194P-201ENST00000363862 105 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 SNORD115-27-201ENST00000364430 82 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 SNORD18B-201ENST00000365659 72 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 SNORA26.4-201ENST00000391188 123 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 SNORA75.5-201ENST00000391291 81 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 MIR3171-201ENST00000584270 74 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 MIR6773-201ENST00000612812 74 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 snoR1.1-201ENST00000628177 80 ntBASIC-1.19□□□□□ -2.6
CLDN6P56747 RNU6-208P-201ENST00000362431 107 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 MIRLET7B-201ENST00000385140 83 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.2□□□□□ -2.6
CLDN6P56747 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.2□□□□□ -2.6
CLDN6P56747 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 RNY4P28-201ENST00000365281 93 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 RNU6-521P-201ENST00000516663 105 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.21□□□□□ -2.6
CLDN6P56747 MIR8062-201ENST00000621515 85 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 AC090617.8-201ENST00000623339 167 ntBASIC-1.21□□□□□ -2.6
CLDN6P56747 SNORD36A-201ENST00000362874 73 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 RNY3P14-201ENST00000384309 102 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 RNU6-635P-201ENST00000516651 102 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 RNU7-6P-201ENST00000516845 62 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 RNU6-762P-201ENST00000517107 102 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 MIR3149-201ENST00000584629 83 ntBASIC-1.22□□□□□ -2.6
CLDN6P56747 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
CLDN6P56747 RNU6-79P-201ENST00000362511 107 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 RNU6-508P-201ENST00000363231 103 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 AL137067.1-201ENST00000615933 120 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 MIR6844-201ENST00000637122 62 ntBASIC-1.23□□□□□ -2.61
CLDN6P56747 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 MIR216B-201ENST00000390186 82 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 SNORD2-201ENST00000459163 69 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 MIR548AM-201ENST00000584298 74 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 AC108081.1-201ENST00000604358 221 ntBASIC-1.24□□□□□ -2.61
CLDN6P56747 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 RNU6-238P-201ENST00000363313 106 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 RNU6-957P-201ENST00000363652 99 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 RNY4P7-201ENST00000364600 96 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 SNORD19-201ENST00000391191 68 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 AC020661.2-201ENST00000560114 134 ntBASIC-1.25□□□□□ -2.61
CLDN6P56747 RNU6-309P-201ENST00000364573 106 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 RNU6-80P-201ENST00000384195 107 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 MIR548H3-201ENST00000408771 118 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.26□□□□□ -2.61
CLDN6P56747 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 SNORD101-201ENST00000384027 73 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 RNU6-639P-201ENST00000384074 107 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 RNU6-695P-201ENST00000391157 104 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.27□□□□□ -2.61
CLDN6P56747 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 MIR3123-201ENST00000583417 75 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 MIR548O2-201ENST00000616090 70 ntBASIC-1.27□□□□□ -2.61
CLDN6P56747 RNU6-774P-201ENST00000363238 107 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 SNORD115-31-201ENST00000365318 82 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 SNORA62.4-201ENST00000365504 151 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
CLDN6P56747 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.28□□□□□ -2.61
CLDN6P56747 SNORA33.2-201ENST00000365413 134 ntBASIC-1.29□□□□□ -2.62
CLDN6P56747 AC018880.2-201ENST00000414265 201 ntBASIC-1.29□□□□□ -2.62
CLDN6P56747 RNY4-201ENST00000516507 96 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms