Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
PMS2P54278 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.46□□□□□ -2.34
PMS2P54278 RNU6-633P-201ENST00000362612 103 ntBASIC0.45□□□□□ -2.34
PMS2P54278 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
PMS2P54278 RNU6-509P-201ENST00000363519 107 ntBASIC0.45□□□□□ -2.34
PMS2P54278 RNU6-497P-201ENST00000365316 104 ntBASIC0.45□□□□□ -2.34
PMS2P54278 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
PMS2P54278 RNU6-811P-201ENST00000384069 107 ntBASIC0.45□□□□□ -2.34
PMS2P54278 RNU6-935P-201ENST00000410371 100 ntBASIC0.45□□□□□ -2.34
PMS2P54278 Y_RNA.620-201ENST00000411009 88 ntBASIC0.45□□□□□ -2.34
PMS2P54278 RNA5SP170-201ENST00000517150 101 ntBASIC0.45□□□□□ -2.34
PMS2P54278 AC104996.3-201ENST00000590718 94 ntBASIC0.45□□□□□ -2.34
PMS2P54278 AC073869.9-201ENST00000641610 120 ntBASIC0.45□□□□□ -2.34
PMS2P54278 Y_RNA.68-201ENST00000362881 102 ntBASIC0.44□□□□□ -2.34
PMS2P54278 RNU6-219P-201ENST00000364728 107 ntBASIC0.44□□□□□ -2.34
PMS2P54278 RNU6-675P-201ENST00000384236 104 ntBASIC0.44□□□□□ -2.34
PMS2P54278 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
PMS2P54278 U3.27-201ENST00000391237 200 ntBASIC0.44□□□□□ -2.34
PMS2P54278 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
PMS2P54278 MIR5706-201ENST00000579841 80 ntBASIC0.44□□□□□ -2.34
PMS2P54278 RNU1-29P-201ENST00000606574 126 ntBASIC0.44□□□□□ -2.34
PMS2P54278 MIRLET7F1-201ENST00000362202 87 ntBASIC0.43□□□□□ -2.34
PMS2P54278 MIR1236-201ENST00000408340 102 ntBASIC0.43□□□□□ -2.34
PMS2P54278 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
PMS2P54278 RNU1-141P-201ENST00000364623 158 ntBASIC0.42□□□□□ -2.34
PMS2P54278 Y_RNA.491-201ENST00000384417 107 ntBASIC0.42□□□□□ -2.34
PMS2P54278 Y_RNA.681-201ENST00000516445 113 ntBASIC0.42□□□□□ -2.34
PMS2P54278 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
PMS2P54278 RNA5SP292-201ENST00000390974 118 ntBASIC0.41□□□□□ -2.34
PMS2P54278 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
PMS2P54278 SNORA18.5-201ENST00000516616 101 ntBASIC0.41□□□□□ -2.34
PMS2P54278 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.41□□□□□ -2.34
PMS2P54278 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
PMS2P54278 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
PMS2P54278 Y_RNA.17-201ENST00000362433 111 ntBASIC0.4□□□□□ -2.35
PMS2P54278 Y_RNA.43-201ENST00000362670 111 ntBASIC0.4□□□□□ -2.35
PMS2P54278 MIR519C-201ENST00000385053 87 ntBASIC0.4□□□□□ -2.35
PMS2P54278 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
PMS2P54278 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
PMS2P54278 RNU6-402P-201ENST00000410678 103 ntBASIC0.4□□□□□ -2.35
PMS2P54278 RNU6-1057P-201ENST00000517162 102 ntBASIC0.4□□□□□ -2.35
PMS2P54278 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
PMS2P54278 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
PMS2P54278 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
PMS2P54278 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
PMS2P54278 RNU4-32P-201ENST00000363404 141 ntBASIC0.39□□□□□ -2.35
PMS2P54278 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
PMS2P54278 RNU6-294P-201ENST00000364999 102 ntBASIC0.39□□□□□ -2.35
PMS2P54278 SNORA63.2-201ENST00000362603 126 ntBASIC0.38□□□□□ -2.35
PMS2P54278 MIR451A-201ENST00000385059 72 ntBASIC0.38□□□□□ -2.35
PMS2P54278 MT-TY-201ENST00000387409 66 ntBASIC0.38□□□□□ -2.35
PMS2P54278 RNA5SP484-201ENST00000458857 111 ntBASIC0.38□□□□□ -2.35
PMS2P54278 AC069503.3-201ENST00000618674 145 ntBASIC0.38□□□□□ -2.35
PMS2P54278 RNU6-1255P-201ENST00000363434 112 ntBASIC0.37□□□□□ -2.35
PMS2P54278 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
PMS2P54278 Y_RNA.593-201ENST00000410292 98 ntBASIC0.37□□□□□ -2.35
PMS2P54278 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
PMS2P54278 RNU6-267P-201ENST00000516714 103 ntBASIC0.37□□□□□ -2.35
PMS2P54278 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
PMS2P54278 MIR4796-201ENST00000580742 81 ntBASIC0.37□□□□□ -2.35
PMS2P54278 SNORA70.25-201ENST00000612741 95 ntBASIC0.37□□□□□ -2.35
PMS2P54278 MIR548O2-201ENST00000616090 70 ntBASIC0.37□□□□□ -2.35
PMS2P54278 RNU6-1134P-201ENST00000365156 101 ntBASIC0.36□□□□□ -2.35
PMS2P54278 RNU6-1051P-201ENST00000365471 102 ntBASIC0.36□□□□□ -2.35
PMS2P54278 SNORA24B-201ENST00000384176 131 ntBASIC0.36□□□□□ -2.35
PMS2P54278 Y_RNA.558-201ENST00000384685 113 ntBASIC0.36□□□□□ -2.35
PMS2P54278 MIR2909-201ENST00000617113 69 ntBASIC0.36□□□□□ -2.35
PMS2P54278 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
PMS2P54278 RNY4P3-201ENST00000365254 95 ntBASIC0.35□□□□□ -2.35
PMS2P54278 SNORD110-201ENST00000408189 75 ntBASIC0.35□□□□□ -2.35
PMS2P54278 RNU7-153P-201ENST00000516455 62 ntBASIC0.35□□□□□ -2.35
PMS2P54278 NAMPTP3-201ENST00000569273 224 ntBASIC0.35□□□□□ -2.35
PMS2P54278 MIR4460-201ENST00000577862 86 ntBASIC0.35□□□□□ -2.35
PMS2P54278 U7.6-201ENST00000610841 64 ntBASIC0.35□□□□□ -2.35
PMS2P54278 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
PMS2P54278 Y_RNA.423-201ENST00000384057 113 ntBASIC0.34□□□□□ -2.36
PMS2P54278 AC093729.1-201ENST00000513074 128 ntBASIC0.34□□□□□ -2.36
PMS2P54278 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.34□□□□□ -2.36
PMS2P54278 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.34□□□□□ -2.36
PMS2P54278 AC023932.2-201ENST00000603176 175 ntBASIC0.34□□□□□ -2.36
PMS2P54278 MIR548BB-201ENST00000626714 66 ntBASIC0.34□□□□□ -2.36
PMS2P54278 MIR450A2-201ENST00000385022 100 ntBASIC0.33□□□□□ -2.36
PMS2P54278 AC006210.1-201ENST00000424882 111 ntBASIC0.33□□□□□ -2.36
PMS2P54278 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
PMS2P54278 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.33□□□□□ -2.36
PMS2P54278 RNU6-624P-201ENST00000363411 107 ntBASIC0.32□□□□□ -2.36
PMS2P54278 SNORD115-37-201ENST00000363768 82 ntBASIC0.32□□□□□ -2.36
PMS2P54278 RNA5SP128-201ENST00000365305 116 ntBASIC0.32□□□□□ -2.36
PMS2P54278 Y_RNA.433-201ENST00000384089 102 ntBASIC0.32□□□□□ -2.36
PMS2P54278 SNORD90-201ENST00000391145 111 ntBASIC0.32□□□□□ -2.36
PMS2P54278 SNORA25.13-201ENST00000516395 103 ntBASIC0.32□□□□□ -2.36
PMS2P54278 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
PMS2P54278 AC140658.3-201ENST00000567603 271 ntBASIC0.32□□□□□ -2.36
PMS2P54278 MIR3140-201ENST00000583685 90 ntBASIC0.32□□□□□ -2.36
PMS2P54278 IGLL4P-201ENST00000614590 133 ntBASIC0.32□□□□□ -2.36
PMS2P54278 Y_RNA.125-201ENST00000363371 111 ntBASIC0.31□□□□□ -2.36
PMS2P54278 RNY1P1-201ENST00000364372 112 ntBASIC0.31□□□□□ -2.36
PMS2P54278 RNU6-820P-201ENST00000384273 107 ntBASIC0.31□□□□□ -2.36
PMS2P54278 HMGN2P22-201ENST00000427588 175 ntBASIC0.31□□□□□ -2.36
PMS2P54278 FGF7P7-201ENST00000514120 227 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms