Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.17□□□□□ -2.6
ACLYP53396 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.17□□□□□ -2.6
ACLYP53396 MIR517B-201ENST00000385102 67 ntBASIC-1.17□□□□□ -2.6
ACLYP53396 AP000533.3-201ENST00000447704 118 ntBASIC-1.17□□□□□ -2.6
ACLYP53396 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 MIR8068-201ENST00000618032 68 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 MIR198-201ENST00000637333 62 ntBASIC-1.18□□□□□ -2.6
ACLYP53396 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
ACLYP53396 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.19□□□□□ -2.6
ACLYP53396 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.19□□□□□ -2.6
ACLYP53396 snoR1.1-201ENST00000628177 80 ntBASIC-1.19□□□□□ -2.6
ACLYP53396 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 SNORA63-201ENST00000363450 132 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 RNY4P6-201ENST00000363667 96 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 SNORA81.3-201ENST00000517283 198 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 MIR4723-201ENST00000585070 81 ntBASIC-1.2□□□□□ -2.6
ACLYP53396 RNU6-151P-201ENST00000364158 107 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-816P-201ENST00000390914 107 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-719P-201ENST00000516671 104 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 MIR6773-201ENST00000612812 74 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 AP001340.1-201ENST00000624405 217 ntBASIC-1.21□□□□□ -2.6
ACLYP53396 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.22□□□□□ -2.6
ACLYP53396 AL158147.1-201ENST00000443970 75 ntBASIC-1.22□□□□□ -2.6
ACLYP53396 RNU6-65P-201ENST00000516332 98 ntBASIC-1.22□□□□□ -2.6
ACLYP53396 RNU6-781P-201ENST00000516377 101 ntBASIC-1.22□□□□□ -2.6
ACLYP53396 AC025521.1-201ENST00000621624 286 ntBASIC-1.22□□□□□ -2.6
ACLYP53396 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 MIR513C-201ENST00000401352 84 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 RNU6-592P-201ENST00000411333 103 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 AL500527.2-201ENST00000454105 95 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 FGF7P7-201ENST00000514120 227 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 MIR4536-1-201ENST00000583537 88 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 uc_338.19-201ENST00000616808 99 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 MIR6738-201ENST00000619620 64 ntBASIC-1.23□□□□□ -2.61
ACLYP53396 SNORD50.2-201ENST00000365465 70 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 AL118496.2-201ENST00000448300 230 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 RNU6-274P-201ENST00000459566 107 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 RNU6-861P-201ENST00000516745 106 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 MIR4499-201ENST00000584834 69 ntBASIC-1.24□□□□□ -2.61
ACLYP53396 RNU4-32P-201ENST00000363404 141 ntBASIC-1.25□□□□□ -2.61
ACLYP53396 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.25□□□□□ -2.61
ACLYP53396 SNORA63.6-201ENST00000364921 119 ntBASIC-1.25□□□□□ -2.61
ACLYP53396 RNU6-24P-201ENST00000384440 107 ntBASIC-1.25□□□□□ -2.61
ACLYP53396 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.25□□□□□ -2.61
ACLYP53396 MIR4324-201ENST00000584846 72 ntBASIC-1.25□□□□□ -2.61
ACLYP53396 SNORD115-23-201ENST00000364461 82 ntBASIC-1.26□□□□□ -2.61
ACLYP53396 MIRLET7B-201ENST00000385140 83 ntBASIC-1.26□□□□□ -2.61
ACLYP53396 RNU6-337P-201ENST00000391243 106 ntBASIC-1.26□□□□□ -2.61
ACLYP53396 MIR378F-201ENST00000578143 78 ntBASIC-1.26□□□□□ -2.61
ACLYP53396 RNU6-682P-201ENST00000363843 106 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 RNU6-905P-201ENST00000384434 107 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 MIR577-201ENST00000385196 96 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 RNU7-85P-201ENST00000458851 63 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 RNU7-120P-201ENST00000459334 63 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 RNA5SP470-201ENST00000516463 106 ntBASIC-1.27□□□□□ -2.61
ACLYP53396 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.28□□□□□ -2.61
ACLYP53396 MIR601-201ENST00000385256 79 ntBASIC-1.28□□□□□ -2.61
ACLYP53396 MIR4320-201ENST00000636981 65 ntBASIC-1.28□□□□□ -2.61
ACLYP53396 RNU6-495P-201ENST00000362995 107 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 U7.2-201ENST00000607576 63 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 AC025166.1-201ENST00000612411 163 ntBASIC-1.29□□□□□ -2.62
ACLYP53396 SNORA63.2-201ENST00000362603 126 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 RNU6-132P-201ENST00000383863 107 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 SNORD18.2-201ENST00000459604 70 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 AC140658.3-201ENST00000567603 271 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 AL513043.2-201ENST00000573941 143 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 MIR4694-201ENST00000578534 80 ntBASIC-1.3□□□□□ -2.62
ACLYP53396 MIR548X2-201ENST00000579776 100 ntBASIC-1.31□□□□□ -2.62
ACLYP53396 MIR4503-201ENST00000582187 83 ntBASIC-1.31□□□□□ -2.62
ACLYP53396 SNORD116-18-201ENST00000383961 92 ntBASIC-1.32□□□□□ -2.62
ACLYP53396 RNU6-10P-201ENST00000384036 107 ntBASIC-1.32□□□□□ -2.62
ACLYP53396 MIR147A-201ENST00000385079 72 ntBASIC-1.32□□□□□ -2.62
ACLYP53396 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
ACLYP53396 RNU6-327P-201ENST00000516270 127 ntBASIC-1.32□□□□□ -2.62
ACLYP53396 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.32□□□□□ -2.62
ACLYP53396 MIR3140-201ENST00000583685 90 ntBASIC-1.32□□□□□ -2.62
ACLYP53396 RNU6-832P-201ENST00000363319 107 ntBASIC-1.33□□□□□ -2.62
ACLYP53396 SNORD58C-201ENST00000365223 64 ntBASIC-1.33□□□□□ -2.62
ACLYP53396 SNORA62.4-201ENST00000365504 151 ntBASIC-1.33□□□□□ -2.62
ACLYP53396 SNORD64-201ENST00000386683 67 ntBASIC-1.33□□□□□ -2.62
ACLYP53396 RNU6-431P-201ENST00000383874 107 ntBASIC-1.34□□□□□ -2.62
ACLYP53396 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 285.3 ms